RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 PALMO75781 387 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 TM7SF2O76062 418 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 CSF2P04141 144 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 GYPCP04921 128 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 CYP1A2P05177 515 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 JUPP14923 745 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 ACP1P24666 158 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 RGRP47804 291 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 CSNK1DP48730 415 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 SUOXP51687 545 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 CLDN6P56747 220 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 PFN3P60673 137 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 NSUN2Q08J23 767 aaKnown RBP eCLIP11.33□□□□□ -0.6
C9orf85-201ENST00000334731 ILKQ13418 452 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 PIGHQ14442 188 aaPredicted RBP11.33□□□□□ -0.6
C9orf85-201ENST00000334731 GRM3Q14832 879 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 DPYSL2Q16555 572 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 UGP2Q16851 508 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 TMEM52BQ4KMG9 183 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 SRLQ86TD4 932 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 VPS36Q86VN1 386 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 CAMK1DQ8IU85 385 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 TP53INP2Q8IXH6 220 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 LZTR1Q8N653 840 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 TSEN2Q8NCE0 465 aaKnown RBP11.33□□□□□ -0.6
C9orf85-201ENST00000334731 OR4C6Q8NH72 309 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 MDM1Q8TC05 714 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 CXorf40AQ8TE69 158 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 ZNF641Q96N77 438 aaPredicted RBP11.33□□□□□ -0.6
C9orf85-201ENST00000334731 CCDC86Q9H6F5 360 aaKnown RBP11.33□□□□□ -0.6
C9orf85-201ENST00000334731 ZWILCHQ9H900 591 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 MBNL1Q9NR56 388 aaKnown RBP11.33□□□□□ -0.6
C9orf85-201ENST00000334731 IPO11Q9UI26 975 aaKnown RBP11.33□□□□□ -0.6
C9orf85-201ENST00000334731 KLF15Q9UIH9 416 aa11.33□□□□□ -0.6
C9orf85-201ENST00000334731 LUC7L2Q9Y383 392 aaKnown RBP11.33□□□□□ -0.6
C9orf85-201ENST00000334731 CHD5Q8TDI0 1954 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 NEMP2A6NFY4 417 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 H3BRJ5 948 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 SCAMP1O15126 338 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 FFAR2O15552 330 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 RARAP10276 462 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 NME1P15531 152 aaKnown RBP11.32□□□□□ -0.6
C9orf85-201ENST00000334731 AMPD1P23109 780 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 CASP14P31944 242 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 HNRNPKP61978 463 aaKnown RBP eCLIP11.32□□□□□ -0.6
C9orf85-201ENST00000334731 IL10RBQ08334 325 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 EIF2B5Q13144 721 aaKnown RBP11.32□□□□□ -0.6
C9orf85-201ENST00000334731 PDE1CQ14123 709 aaPredicted RBP11.32□□□□□ -0.6
C9orf85-201ENST00000334731 SMTNL2Q2TAL5 461 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 TXNRD3NBQ6F5E7 133 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 ALKBH5Q6P6C2 394 aaKnown RBP11.32□□□□□ -0.6
C9orf85-201ENST00000334731 BRAT1Q6PJG6 821 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 POLNQ7Z5Q5 900 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 PARGQ86W56 976 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 NIPA2Q8N8Q9 360 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 HSPH1Q92598 858 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 BTBD6Q96KE9 485 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 NSMCE3Q96MG7 304 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 TUBGCP5Q96RT8 1024 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 WRAP53Q9BUR4 548 aaKnown RBP11.32□□□□□ -0.6
C9orf85-201ENST00000334731 NUP85Q9BW27 656 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 SP110Q9HB58 689 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 PCDH12Q9NPG4 1184 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.32□□□□□ -0.6
C9orf85-201ENST00000334731 ETNK2Q9NVF9 386 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 NENFQ9UMX5 172 aa11.32□□□□□ -0.6
C9orf85-201ENST00000334731 COL5A1P20908 1838 aaPredicted RBP11.32□□□□□ -0.6
C9orf85-201ENST00000334731 K7ESM1 405 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 MUSKO15146 869 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 NEBLO76041 1014 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 XPAP23025 273 aaPredicted RBP11.31□□□□□ -0.6
C9orf85-201ENST00000334731 HNRNPH3P31942 346 aaKnown RBP11.31□□□□□ -0.6
C9orf85-201ENST00000334731 IGFALSP35858 605 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 ARL4AP40617 200 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 YPEL5P62699 121 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 SLC25A11Q02978 314 aaKnown RBP11.31□□□□□ -0.6
C9orf85-201ENST00000334731 CYP4F3Q08477 520 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 SLC10A7Q0GE19 358 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 ELP6Q0PNE2 266 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 TARDBPQ13148 414 aaKnown RBP eCLIP11.31□□□□□ -0.6
C9orf85-201ENST00000334731 RFTN1Q14699 578 aaPredicted RBP11.31□□□□□ -0.6
C9orf85-201ENST00000334731 SKOR2Q2VWA4 1001 aaPredicted RBP11.31□□□□□ -0.6
C9orf85-201ENST00000334731 HS1BP3Q53T59 392 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 CCDC122Q5T0U0 273 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 HES3Q5TGS1 186 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 ZSWIM9Q86XI8 627 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 FAM181AQ8N9Y4 354 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 TP53I13Q8NBR0 393 aaPredicted RBP11.31□□□□□ -0.6
C9orf85-201ENST00000334731 ZNF548Q8NEK5 533 aaPredicted RBP11.31□□□□□ -0.6
C9orf85-201ENST00000334731 TEKT4Q8WW24 435 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 RFFLQ8WZ73 363 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 CSPG4P5Q96PW8 444 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 DUSP23Q9BVJ7 150 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 CINPQ9BW66 212 aaPredicted RBP11.31□□□□□ -0.6
C9orf85-201ENST00000334731 C1QTNF7Q9BXJ2 289 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 XPO4Q9C0E2 1151 aaKnown RBP11.31□□□□□ -0.6
C9orf85-201ENST00000334731 ATP13A3Q9H7F0 1226 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 NLGN3Q9NZ94 848 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 DKK4Q9UBT3 224 aa11.31□□□□□ -0.6
C9orf85-201ENST00000334731 IP6K2Q9UHH9 426 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms