RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 RAPSNQ13702 412 aa10.4□□□□□ -0.74
SPTBN1-201ENST00000333896 BRMS1LQ5PSV4 323 aa10.4□□□□□ -0.74
SPTBN1-201ENST00000333896 IP6K1Q92551 441 aa10.4□□□□□ -0.74
SPTBN1-201ENST00000333896 TRNT1Q96Q11 434 aaKnown RBP10.4□□□□□ -0.74
SPTBN1-201ENST00000333896 GFM1Q96RP9 751 aaKnown RBP10.4□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF518BQ9C0D4 1074 aa10.4□□□□□ -0.74
SPTBN1-201ENST00000333896 CCDC167Q9P0B6 97 aa10.4□□□□□ -0.74
SPTBN1-201ENST00000333896 GLI2P10070 1586 aa10.4□□□□□ -0.74
SPTBN1-201ENST00000333896 NRXN1Q9ULB1 1477 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 PRAMEF33A0A0G2JMD5 474 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 DFNA5O60443 496 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 ACSL4O60488 711 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 CCNT2O60583 730 aaKnown RBP10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 PRAMEF10O60809 474 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 RP2O75695 350 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 FCER1AP12319 257 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 ANKDD1AQ495B1 522 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 MRNIPQ6NTE8 343 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 PGAM4Q8N0Y7 254 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 OR7G1Q8NGA0 311 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 EPS8L1Q8TE68 723 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 HSPBAP1Q96EW2 488 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 NFKBIZQ9BYH8 718 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 LACRTQ9GZZ8 138 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 TBC1D30Q9Y2I9 924 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 ACOT9Q9Y305 439 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 ERVK-7P63135 1459 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 H3BM21 787 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 SUPT20HL1Q3ZLR7 823 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 BOLA3Q53S33 107 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 N4BP2L1Q5TBK1 243 aaPredicted RBP10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF572Q7Z3I7 529 aaPredicted RBP10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 OSBP2Q969R2 916 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 LXNQ9BS40 222 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 SENP2Q9HC62 589 aa10.4□□□□□ -0.75
SPTBN1-201ENST00000333896 ZW10O43264 779 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 EDF1O60869 148 aaKnown RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 PLEKHA8P1O95397 391 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 IL7P13232 177 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 MAGP20916 626 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 E2F2Q14209 437 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 INTS11Q5TA45 600 aaKnown RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 AADACL4Q5VUY2 407 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 PLCZ1Q86YW0 608 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 PHB2Q99623 299 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 TMEM109Q9BVC6 243 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ARHGAP28Q9P2N2 729 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ERI2A8K979 691 aaKnown RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 TTC34A8MYJ7 566 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 HOXC9P31274 260 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 AQP4P55087 323 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 RPP38P78345 283 aaKnown RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 CTC1Q2NKJ3 1217 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ARHGAP15Q53QZ3 475 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 STRIP1Q5VSL9 837 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 SWSAP1Q6NVH7 229 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 MTFMTQ96DP5 389 aaKnown RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 PHF21BQ96EK2 531 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 EXD2Q9NVH0 621 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 HOXC10Q9NYD6 342 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 POFUT2Q9Y2G5 429 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 PDE2AO00408 941 aaPredicted RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 USP12O75317 370 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 LTFP02788 710 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 USP17L8P0C7I0 530 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 RORCP51449 518 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 SLC18A1P54219 525 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 GNA13Q14344 377 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ZBTB6Q15916 424 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 CA9Q16790 459 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 USPL1Q5W0Q7 1092 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ZBTB46Q86UZ6 589 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 CCDC54Q8NEL0 328 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 TCTEX1D2Q8WW35 142 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ITCHQ96J02 903 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 OSBPL7Q9BZF2 842 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 CLPBQ9H078 707 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 USP20Q9Y2K6 914 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 PLB1Q6P1J6 1458 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 KDM6BO15054 1643 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 SNAP29O95721 258 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 CYP2C8P10632 490 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 RBM34P42696 430 aaKnown RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 MVKQ03426 396 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 MGAT5Q09328 741 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ADGRE1Q14246 886 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF267Q14586 743 aaPredicted RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 WDR72Q3MJ13 1102 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF621Q6ZSS3 439 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 HDDC3Q8N4P3 179 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 C12orf50Q8NA57 414 aaPredicted RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ZSWIM2Q8NEG5 633 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 TNFAIP8L1Q8WVP5 186 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 CPNE5Q9HCH3 593 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 PCDHB16Q9NRJ7 776 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ABT1Q9ULW3 272 aaKnown RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ERBB3P21860 1342 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 IFRD1O00458 451 aaPredicted RBP10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 BPNT1O95861 308 aa10.39□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF14P17017 642 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms