RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 ZNF683Q8IZ20 524 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 LSMEM2Q8N112 164 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 LZTR1Q8N653 840 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 FAM156AQ8NDB6 213 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 OR6K2Q8NGY2 324 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 DCLRE1BQ9H816 532 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 PRDM5Q9NQX1 630 aaPredicted RBP18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 PTGDR2Q9Y5Y4 395 aa18.31■□□□□ 0.52
LYSMD4-201ENST00000332728 A0A088AWK7 358 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 CBX4O00257 560 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 CIB2O75838 187 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 IL1BP01584 269 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 SELPP16109 830 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 HOXC13P31276 330 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 CPOXP36551 454 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 ABL2P42684 1182 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 NUDT2P50583 147 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 SEMG2Q02383 582 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 PPP1R3AQ16821 1122 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 TMEM207Q6UWW9 146 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 EFHBQ8N7U6 833 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 SCG3Q8WXD2 468 aaKnown RBP18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 IMP4Q96G21 291 aaKnown RBP18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 TREX1Q9NSU2 369 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 TMEM161AQ9NX61 479 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 PCDHGC4Q9Y5F7 938 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 CASP8AP2Q9UKL3 1982 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 GALTP07902 379 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 RHOQP17081 205 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 CST5P28325 142 aaPredicted RBP18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 SEMA3AQ14563 771 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 LBRQ14739 615 aaKnown RBP18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 LIPMQ5VYY2 423 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 KBTBD2Q8IY47 623 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 MICAL1Q8TDZ2 1067 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 UCMAQ8WVF2 138 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 RMDN1Q96DB5 314 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 NAF1Q96HR8 494 aaKnown RBP18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 BTN2A3PQ96KV6 586 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 MCMBPQ9BTE3 642 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 FAM50BQ9Y247 325 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 SSX2IPQ9Y2D8 614 aa18.3■□□□□ 0.52
LYSMD4-201ENST00000332728 EYSQ5T1H1 3165 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 NCF1BA6NI72 391 aaPredicted RBP18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 NCF1CA8MVU1 366 aaPredicted RBP18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 A8MX80 341 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 ARVCFO00192 962 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 NCF1P14598 390 aaPredicted RBP18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 TACR2P21452 398 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 SEL1L3Q68CR1 1132 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 KIAA1841Q6NSI8 718 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 EPGNQ6UW88 154 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 ZYG11AQ6WRX3 759 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 TRIM67Q6ZTA4 783 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 GPR78Q96P69 363 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 DEFB118Q96PH6 123 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 TUBB6Q9BUF5 446 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 TRIM62Q9BVG3 475 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 TRPC7Q9HCX4 862 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 SCN5AQ14524 2016 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 C2orf78A6NCI8 922 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 GRID2O43424 1007 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 CACNG3O60359 315 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 ENO3P13929 434 aaPredicted RBP18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 KLF10Q13118 480 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 PLD1Q13393 1074 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 DEFB115Q30KQ5 88 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 POTEHQ6S545 545 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 FBXO22Q8NEZ5 403 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 ARRDC2Q8TBH0 407 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 RAB3IL1Q8TBN0 382 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 C8orf48Q96LL4 319 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 ZBED2Q9BTP6 218 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 UNC93B1Q9H1C4 597 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 PLK2Q9NYY3 685 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 MIA3Q5JRA6 1907 aa18.29■□□□□ 0.52
LYSMD4-201ENST00000332728 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 SLC38A8A6NNN8 435 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 TM7SF2O76062 418 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 SIX3O95343 332 aaPredicted RBP18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 COX4I1P13073 169 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 RPL14P50914 215 aaKnown RBP18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 LAYNQ6UX15 382 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 ESAMQ96AP7 390 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 GREB1Q4ZG55 1949 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 SEC24AO95486 1093 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 PAMP19021 973 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 ITGAXP20702 1163 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 SOX11P35716 441 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 HNRNPDQ14103 355 aaKnown RBP18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 TRIP4Q15650 581 aaPredicted RBP18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 HECTD2Q5U5R9 776 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 AFMIDQ63HM1 303 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 UMODL1-AS1Q8N2C9 162 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 DCBLD1Q8N8Z6 715 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 C2CD4AQ8NCU7 369 aaPredicted RBP18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 NPAS2Q99743 824 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 TMEM248Q9NWD8 314 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 AK5Q9Y6K8 562 aa18.28■□□□□ 0.52
LYSMD4-201ENST00000332728 NVLO15381 856 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms