RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 RHPN2Q8IUC4 686 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 APOBEC3FQ8IUX4 373 aaKnown RBP7.55□□□□□ -1.2
TRIM49-201ENST00000329758 LYSMD2Q8IV50 215 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 BRSK2Q8IWQ3 736 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 ADGRG5Q8IZF4 528 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 CARNMT1Q8N4J0 409 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 OR6Q1Q8NGQ2 317 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 STON2Q8WXE9 905 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 HERVK_113Q902F9 699 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 PIK3R3Q92569 461 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 PMEPA1Q969W9 287 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 ATP6V1E2Q96A05 226 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 IL12RB2Q99665 862 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 C17orf62Q9BQA9 187 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 TRIM15Q9C019 465 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 MTMR12Q9C0I1 747 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 IFT22Q9H7X7 185 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 ACAD9Q9H845 621 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 ZNF395Q9H8N7 513 aaPredicted RBP7.55□□□□□ -1.2
TRIM49-201ENST00000329758 TIGARQ9NQ88 270 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 WASH6PQ9NQA3 447 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 RPRD1BQ9NQG5 326 aaKnown RBP7.55□□□□□ -1.2
TRIM49-201ENST00000329758 DDX28Q9NUL7 540 aaKnown RBP7.55□□□□□ -1.2
TRIM49-201ENST00000329758 ANAPC7Q9UJX3 599 aa7.55□□□□□ -1.2
TRIM49-201ENST00000329758 NOCTQ9UK39 431 aaKnown RBP7.55□□□□□ -1.2
TRIM49-201ENST00000329758 LOC100653049A0A140TA62 436 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 TCRBV3S1A0A5B6 114 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 MAGEB16A2A368 324 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 RGSL1A5PLK6 1076 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 A8MX80 341 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 PI4K2BG5E9Z4 385 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 INO80B-WBP1J3KQ70 363 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 HNRNPDLO14979 420 aaKnown RBP7.54□□□□□ -1.2
TRIM49-201ENST00000329758 DCXO43602 365 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 KRT34O76011 436 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ALDH1A2O94788 518 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 EPN2O95208 641 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 KCNH1O95259 989 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 TRIM16O95361 564 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 MAP3K6O95382 1288 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 DLGAP3O95886 979 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 SERPINE1P05121 402 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 CFHP08603 1231 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 TRAPPC2P0DI81 140 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 TRAPPC2BP0DI82 140 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 MAPTP10636 758 aaKnown RBP7.54□□□□□ -1.2
TRIM49-201ENST00000329758 FGFR3P22607 806 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 TALDO1P37837 337 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 SLC1A6P48664 564 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 MCCD1P59942 119 aaPredicted RBP7.54□□□□□ -1.2
TRIM49-201ENST00000329758 RACK1P63244 317 aaKnown RBP7.54□□□□□ -1.2
TRIM49-201ENST00000329758 GPLD1P80108 840 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 TYSND1Q2T9J0 566 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ESCO2Q56NI9 601 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 CLVS2Q5SYC1 327 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 CCNYL2Q5T2Q4 361 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 MBLAC2Q68D91 279 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 SLC9A9Q8IVB4 645 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 RHOT1Q8IXI2 618 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 PHTF2Q8N3S3 785 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 PPP1R13LQ8WUF5 828 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ANKRD49Q8WVL7 239 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ZNF516Q92618 1163 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 PBXIP1Q96AQ6 731 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 PPP1R16BQ96T49 567 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 WDR83Q9BRX9 315 aaKnown RBP7.54□□□□□ -1.2
TRIM49-201ENST00000329758 SEMA6AQ9H2E6 1030 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 PDZD7Q9H5P4 517 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 TMEM206Q9H813 350 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 PLEKHA5Q9HAU0 1116 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 CYP26B1Q9NR63 512 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 DNMT3LQ9UJW3 386 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 CNOT6Q9ULM6 557 aaKnown RBP7.54□□□□□ -1.2
TRIM49-201ENST00000329758 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRIM49-201ENST00000329758 PCDHGC3Q9UN70 934 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 RAD54BQ9Y620 910 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ARID2Q68CP9 1835 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 SOWAHBA6NEL2 793 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 C16orf96A6NNT2 1141 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ATP6V1G2-DDX39BF2Z307 99 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ZNF195O14628 629 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 AIM2O14862 343 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 PAPSS1O43252 624 aaPredicted RBP7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ZBTB14O43829 449 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 TADA2AO75478 443 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 BANF1O75531 89 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 TOM1L1O75674 476 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ZMPSTE24O75844 475 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 SLITRK5O94991 958 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 IL18RAPO95256 599 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 VAPBO95292 243 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 LYPLA2O95372 231 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ARIH2O95376 493 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ITGAVP06756 1048 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 YES1P07947 543 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 GFAPP14136 432 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ATF6P18850 670 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 HTR2BP41595 481 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 GABRB2P47870 512 aa7.54□□□□□ -1.2
TRIM49-201ENST00000329758 ALDH7A1P49419 539 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms