RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TMEM8AQ9HCN3 771 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 FANCFQ9NPI8 374 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 MRPL39Q9NYK5 338 aaKnown RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 COPG2Q9UBF2 871 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 WARS2Q9UGM6 360 aaKnown RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 MAFFQ9ULX9 164 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 MBL2P11226 248 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-201ENST00000328923 ALAS2P22557 587 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 EPHX2P34913 555 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 GRIK1P39086 918 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 TAS2R40P59535 323 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 GCNT1Q02742 428 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 DBPQ10586 325 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-201ENST00000328923 MERTKQ12866 999 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 LAMC2Q13753 1193 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 LIN9Q5TKA1 542 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 TMEM236Q5W0B7 351 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 SLC16A12Q6ZSM3 486 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 MON1BQ7L1V2 547 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 DAW1Q8N136 415 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 NAT16Q8N8M0 369 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 IL17RDQ8NFM7 739 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 FAM110BQ8TC76 370 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 DHX38Q92620 1227 aaKnown RBP11.94□□□□□ -0.5
SHMT2-201ENST00000328923 SEMA4DQ92854 862 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 PPWD1Q96BP3 646 aaKnown RBP11.94□□□□□ -0.5
SHMT2-201ENST00000328923 TMEM80Q96HE8 168 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 FUNDC2Q9BWH2 189 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 TOR3AQ9H497 397 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 SLC35C2Q9NQQ7 365 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 DCAF16Q9NXF7 216 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 GMEB2Q9UKD1 530 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 SNCAIPQ9Y6H5 919 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 MYH9P35579 1960 aaKnown RBP11.94□□□□□ -0.5
SHMT2-201ENST00000328923 PDZK1P1A8MUH7 402 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 LEUTXA8MZ59 168 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 E7ENX8 843 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 NRP1O14786 923 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 UPK1BO75841 260 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 OR5F1O95221 314 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 EIF2DP41214 584 aaKnown RBP11.94□□□□□ -0.5
SHMT2-201ENST00000328923 NSFP46459 744 aaKnown RBP11.94□□□□□ -0.5
SHMT2-201ENST00000328923 NPTX2P47972 431 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 SRP54P61011 504 aaKnown RBP11.94□□□□□ -0.5
SHMT2-201ENST00000328923 CCNA1P78396 465 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 ENPEPQ07075 957 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 NAB1Q13506 487 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 POLD3Q15054 466 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-201ENST00000328923 C2CD6Q53TS8 623 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 TEDDM1Q5T9Z0 273 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 LRRC38Q5VT99 294 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 STEAP3Q658P3 488 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 XAF1Q6GPH4 301 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 ABRAXAS1Q6UWZ7 409 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 BBS12Q6ZW61 710 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 PPIL6Q8IXY8 311 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 CBR4Q8N4T8 237 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 FKBP10Q96AY3 582 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 RCN3Q96D15 328 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 DACH2Q96NX9 599 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 CBWD1Q9BRT8 395 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 GON7Q9BXV9 100 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 ALOXE3Q9BYJ1 711 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 GHITMQ9H3K2 345 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 PCIF1Q9H4Z3 704 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 ACOXLQ9NUZ1 547 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 NYAP2Q9P242 653 aa11.94□□□□□ -0.5
SHMT2-201ENST00000328923 IFT80Q9P2H3 777 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-201ENST00000328923 CNOT6Q9ULM6 557 aaKnown RBP11.94□□□□□ -0.5
SHMT2-201ENST00000328923 COL4A5P29400 1685 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 H0Y858 1186 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 TBX1O43435 398 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 NOS1APO75052 506 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-201ENST00000328923 TIPRLO75663 272 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 KRT7P08729 469 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 ZNF76P36508 570 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 HLCSP50747 726 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 GALNT3Q14435 633 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 PM20D1Q6GTS8 502 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 PMF1Q6P1K2 205 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 RSBN1LQ6PCB5 846 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-201ENST00000328923 LACC1Q8IV20 430 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 OR6Q1Q8NGQ2 317 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 SLC44A1Q8WWI5 657 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 APBB2Q92870 758 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 ST6GAL2Q96JF0 529 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 SLITRK1Q96PX8 696 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 GDF15Q99988 308 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 FRMD8P1Q9BZ68 369 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-201ENST00000328923 PCDHAC1Q9H158 963 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 FBXO8Q9NRD0 319 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 RAB20Q9NX57 234 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 PIM2Q9P1W9 311 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 DIMT1Q9UNQ2 313 aaKnown RBP11.93□□□□□ -0.5
SHMT2-201ENST00000328923 PCNTO95613 3336 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 BET1O15155 118 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 RAD17O75943 681 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 SLC1A6P48664 564 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 APLP1P51693 650 aa11.93□□□□□ -0.5
SHMT2-201ENST00000328923 ATN1P54259 1190 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms