RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 TXNDC8Q6A555 127 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 C4orf22Q6V702 233 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 PGBD5Q8N414 524 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 DNAJC9Q8WXX5 260 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 C7orf26Q96N11 449 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 NSUN5Q96P11 429 aaKnown RBP10.73□□□□□ -0.69
CUL4A-201ENST00000326335 CDRT15Q96T59 188 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 SMOC2Q9H3U7 446 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 SEMA4BQ9NPR2 832 aaPredicted RBP10.73□□□□□ -0.69
CUL4A-201ENST00000326335 TLR8Q9NR97 1041 aaKnown RBP10.73□□□□□ -0.69
CUL4A-201ENST00000326335 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.73□□□□□ -0.69
CUL4A-201ENST00000326335 NCKIPSDQ9NZQ3 722 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 FCF1Q9Y324 198 aaKnown RBP10.73□□□□□ -0.69
CUL4A-201ENST00000326335 TCAF1Q9Y4C2 921 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 TIMM22Q9Y584 194 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 F5P12259 2224 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 REV3LO60673 3130 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 PSMG1O95456 288 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 SLC6A4P31645 630 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 KCNC1P48547 511 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 PIK3CGP48736 1102 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 NPY2RP49146 381 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 RENBPP51606 427 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 MRPS22P82650 360 aaKnown RBP10.73□□□□□ -0.69
CUL4A-201ENST00000326335 KCTD11Q693B1 232 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 DENND5AQ6IQ26 1287 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 FBXO22Q8NEZ5 403 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 OR4K2Q8NGD2 314 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 NRG4Q8WWG1 115 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 NAF1Q96HR8 494 aaKnown RBP10.73□□□□□ -0.69
CUL4A-201ENST00000326335 SSU72Q9NP77 194 aaKnown RBP10.73□□□□□ -0.69
CUL4A-201ENST00000326335 FETUBQ9UGM5 382 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 Q9Y3F1 56 aa10.73□□□□□ -0.69
CUL4A-201ENST00000326335 MYOFQ9NZM1 2061 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 H0Y626 953 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 NVLO15381 856 aaKnown RBP10.72□□□□□ -0.69
CUL4A-201ENST00000326335 ALDH1A2O94788 518 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 GUCA1CO95843 209 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 CDKN2DP55273 166 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 ART3Q13508 389 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 ZNF697Q5TEC3 545 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 IZUMO2Q6UXV1 221 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 LINC00523Q86TU6 105 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 CACUL1Q86Y37 369 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 ATP6V0D2Q8N8Y2 350 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 NUDT8Q8WV74 236 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 RHOJQ9H4E5 214 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 PCDHB8Q9UN66 801 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 M0QZQ0 153 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 OR1I1O60431 355 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 ALPIP09923 528 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 MBL2P11226 248 aaPredicted RBP10.72□□□□□ -0.69
CUL4A-201ENST00000326335 PAMP19021 973 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 PAX7P23759 505 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 CCNCP24863 283 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 CCNFP41002 786 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 MAGEA6P43360 314 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 RPL34P49207 117 aaKnown RBP10.72□□□□□ -0.69
CUL4A-201ENST00000326335 HARS2P49590 506 aaKnown RBP10.72□□□□□ -0.69
CUL4A-201ENST00000326335 DSC3Q14574 896 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 TRIP10Q15642 601 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 STEAP4Q687X5 459 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 LIMS2Q7Z4I7 341 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 PPFIBP2Q8ND30 876 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 INPP5DQ92835 1189 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 SEMA6AQ9H2E6 1030 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 TNKS2Q9H2K2 1166 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 HIPK3Q9H422 1215 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 DLGAP2Q9P1A6 1054 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 UBXN8O00124 270 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 MTSS1O43312 755 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 GOT2P00505 430 aaKnown RBP10.72□□□□□ -0.69
CUL4A-201ENST00000326335 CKMP06732 381 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 CHRM3P20309 590 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 CORO1AP31146 461 aaKnown RBP10.72□□□□□ -0.69
CUL4A-201ENST00000326335 SCNN1AP37088 669 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 SLC18A1P54219 525 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 SCAPQ12770 1279 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 SGO1Q5FBB7 561 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 MRPL10Q7Z7H8 261 aaKnown RBP10.72□□□□□ -0.69
CUL4A-201ENST00000326335 SPATA24Q86W54 205 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 TMPRSS6Q8IU80 811 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 ARL14EPQ8N8R7 260 aaPredicted RBP10.72□□□□□ -0.69
CUL4A-201ENST00000326335 ZNF296Q8WUU4 475 aaPredicted RBP10.72□□□□□ -0.69
CUL4A-201ENST00000326335 SPDL1Q96EA4 605 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 CINPQ9BW66 212 aaPredicted RBP10.72□□□□□ -0.69
CUL4A-201ENST00000326335 CCDC68Q9H2F9 335 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 FBXO44Q9H4M3 255 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 CXorf56Q9H5V9 222 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 VPS28Q9UK41 221 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 PCDHB9Q9Y5E1 797 aa10.72□□□□□ -0.69
CUL4A-201ENST00000326335 CCDC162PA2VCL2 907 aa10.71□□□□□ -0.69
CUL4A-201ENST00000326335 SUPT3HB4E1H0 165 aa10.71□□□□□ -0.69
CUL4A-201ENST00000326335 SH3BGRLO75368 114 aa10.71□□□□□ -0.69
CUL4A-201ENST00000326335 KATNA1O75449 491 aa10.71□□□□□ -0.69
CUL4A-201ENST00000326335 SUPT3HO75486 399 aa10.71□□□□□ -0.69
CUL4A-201ENST00000326335 TSHRP16473 764 aa10.71□□□□□ -0.69
CUL4A-201ENST00000326335 ATF6P18850 670 aa10.71□□□□□ -0.69
CUL4A-201ENST00000326335 CYP4F8P98187 520 aa10.71□□□□□ -0.69
CUL4A-201ENST00000326335 PDAP1Q13442 181 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms