RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 CSPG5O95196 566 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 FGFR3P22607 806 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 PPARGP37231 505 aaPredicted RBP17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 GPR15P49685 360 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 ARPP19P56211 112 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 SEL1L3Q68CR1 1132 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 TMEM173Q86WV6 379 aaPredicted RBP17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 PPP1R14BQ96C90 147 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 UROC1Q96N76 676 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 SPATA13Q96N96 652 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 AGAP3Q96P47 875 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 NPY6RQ99463 290 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 LGMNQ99538 433 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 GPR62Q9BZJ7 368 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 COQ10BQ9H8M1 238 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 TMEM161AQ9NX61 479 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 ARHGEF38Q9NXL2 777 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 ABI2Q9NYB9 513 aaPredicted RBP17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 DTLQ9NZJ0 730 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 HDAC3O15379 428 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 NOS2P35228 1153 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 RAB41Q5JT25 222 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 GRTP1Q5TC63 336 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 BHLHA9Q7RTU4 235 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 STRA8Q7Z7C7 330 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 SCN4BQ8IWT1 228 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 THEM5Q8N1Q8 247 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 CASD1Q96PB1 797 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 NPAS2Q99743 824 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 CPNE1Q99829 537 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 HIPK3Q9H422 1215 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 FAM72CH0Y354 149 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 ACOT8O14734 319 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 DAB1O75553 588 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 SOAT2O75908 522 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 VAPBO95292 243 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 CAPNS1P04632 268 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 GRIK1P39086 918 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 TRIM60Q495X7 471 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 FAM72AQ5TYM5 149 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 FAM72DQ6L9T8 149 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 SETD3Q86TU7 594 aaPredicted RBP17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 FAM72BQ86X60 149 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 TTC9BQ8N6N2 239 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 FTHL17Q9BXU8 183 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 BLOC1S6Q9UL45 172 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 SNX10Q9Y5X0 201 aa17.34■□□□□ 0.37
SCAMP4-201ENST00000316097 TTC3P53804 2025 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 H6PDO95479 791 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 POLBP06746 335 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 MNX1P50219 401 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 TLE2Q04725 743 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 OLIG2Q13516 323 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 FAM171A1Q5VUB5 890 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 KRT80Q6KB66 452 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 FSTL4Q6MZW2 842 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 TP53INP2Q8IXH6 220 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 CSPG4P5Q96PW8 444 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 RBBP8Q99708 897 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 CSNK1G1Q9HCP0 422 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 RRN3Q9NYV6 651 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 ADA2Q9NZK5 511 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 OGDHLQ9ULD0 1010 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 LRFN2Q9ULH4 789 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 FZD10Q9ULW2 581 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 FRMPD3Q5JV73 1810 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 INPPL1O15357 1258 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 ZFXP17010 805 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 SPRP35270 261 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 MAGEA12P43365 314 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 ALDH3B2P48448 385 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 NR2C2P49116 596 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 DPYSL2Q16555 572 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 DDR2Q16832 855 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 SPATA2LQ8IUW3 424 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 MYO1HQ8N1T3 1032 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 BBS5Q8N3I7 341 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 NT5C3BQ969T7 300 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 FCRL3Q96P31 734 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 SLC2A13Q96QE2 648 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 AGAP2Q99490 1192 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 TMEM79Q9BSE2 394 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 EFCAB1Q9HAE3 211 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 NMRAL1Q9HBL8 299 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 C20orf96Q9NUD7 363 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 SEPT10Q9P0V9 454 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 DSEQ9UL01 958 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 RAP2CQ9Y3L5 183 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 ZNF711Q9Y462 761 aa17.33■□□□□ 0.36
SCAMP4-201ENST00000316097 SUPT3HO75486 399 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 PIGNO95427 931 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 PSMB4P28070 264 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 SCNN1AP37088 669 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 ENTPD1P49961 510 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 RPL14P50914 215 aaKnown RBP17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 NDST2P52849 883 aa17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 TXNL4AP83876 142 aaKnown RBP17.32■□□□□ 0.36
SCAMP4-201ENST00000316097 TSPY1Q01534 308 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms