RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 KRT6AP02538 564 aa13.77□□□□□ -0.2
DDX54-202ENST00000314045 KRT6BP04259 564 aa13.77□□□□□ -0.2
DDX54-202ENST00000314045 KRT6CP48668 564 aa13.77□□□□□ -0.2
DDX54-202ENST00000314045 SLC9A4Q6AI14 798 aa13.77□□□□□ -0.2
DDX54-202ENST00000314045 RD3Q7Z3Z2 195 aa13.77□□□□□ -0.2
DDX54-202ENST00000314045 CST5P28325 142 aaPredicted RBP13.77□□□□□ -0.21
DDX54-202ENST00000314045 AGKQ53H12 422 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 ESRP1Q6NXG1 681 aaKnown RBP13.77□□□□□ -0.21
DDX54-202ENST00000314045 FAM151BQ6UXP7 276 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 TEX9Q8N6V9 391 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 PQLC3Q8N755 202 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 NAT8LQ8N9F0 302 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 SH3RF2Q8TEC5 729 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 TMEM174Q8WUU8 243 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 SH3GL2Q99962 352 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 FAM126AQ9BYI3 521 aaPredicted RBP13.77□□□□□ -0.21
DDX54-202ENST00000314045 NMRK1Q9NWW6 199 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 SLC17A7Q9P2U7 560 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 XPR1Q9UBH6 696 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 VTI1BQ9UEU0 232 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 NCKAP1Q9Y2A7 1128 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 FOXO6A8MYZ6 492 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 CCL22O00626 93 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 ZBTB14O43829 449 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 NFATC1O95644 943 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 CALB2P22676 271 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 IFNA8P32881 189 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 ANKS1BQ7Z6G8 1248 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 OR56A4Q8NGH8 313 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 PIP4K2CQ8TBX8 421 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.21
DDX54-202ENST00000314045 RPL10LQ96L21 214 aaKnown RBP13.77□□□□□ -0.21
DDX54-202ENST00000314045 COPS8Q99627 209 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 TNKS2Q9H2K2 1166 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 BRD9Q9H8M2 597 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 ZFYVE1Q9HBF4 777 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 COMMD8Q9NX08 183 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 ARL15Q9NXU5 204 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 DYRK1BQ9Y463 629 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 LAMB1P07942 1786 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 BRWD3Q6RI45 1802 aa13.77□□□□□ -0.21
DDX54-202ENST00000314045 INSIG1O15503 277 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 CHRNA4P43681 627 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 MSLNQ13421 630 aaPredicted RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 CRY1Q16526 586 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 TRMT10BQ6PF06 316 aaKnown RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 PTGR2Q8N8N7 351 aaPredicted RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 CEP70Q8NHQ1 597 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 RUBCNLQ9H714 662 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 SLC40A1Q9NP59 571 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 TCAF1Q9Y4C2 921 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 TCRBV7S3A2A0A539 114 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 MGEA5O60502 916 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 GRIA1P42261 906 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 AFF1P51825 1210 aaKnown RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 ARMC6Q6NXE6 501 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 ADGRD1Q6QNK2 874 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 CHST9Q7L1S5 443 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 HOMEZQ8IX15 550 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 ZCWPW1Q9H0M4 648 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 EIF2B3Q9NR50 452 aaKnown RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 RABGEF1Q9UJ41 708 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 PHF24Q9UPV7 400 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 USP1O94782 785 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 CATP04040 527 aaKnown RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 SLC10A7Q0GE19 358 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 MOGSQ13724 837 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 CYLC2Q14093 348 aaPredicted RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 RASIP1Q5U651 963 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 CXorf40AQ8TE69 158 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 OXNAD1Q96HP4 312 aaPredicted RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 FCRL5Q96RD9 977 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 RAD18Q9NS91 495 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 ARMCX1Q9P291 453 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 FCF1Q9Y324 198 aaKnown RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 INSL5Q9Y5Q6 135 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 RPP40O75818 363 aaKnown RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 ITGB1P05556 798 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 KRT16P08779 473 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 INPP5AQ14642 412 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 SPDYE7PQ495Y7 208 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 MARK2Q7KZI7 788 aaKnown RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 DET1Q7L5Y6 550 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 GPRIN1Q7Z2K8 1008 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 OR8D1Q8WZ84 308 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 CATSPER2Q96P56 530 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 MRPL57Q9BQC6 102 aaKnown RBP13.76□□□□□ -0.21
DDX54-202ENST00000314045 HGH1Q9BTY7 390 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 TAGLN3Q9UI15 199 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 GNPTGQ9UJJ9 305 aa13.76□□□□□ -0.21
DDX54-202ENST00000314045 EVPLLA8MZ36 301 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 PAFAH1B3Q15102 231 aaKnown RBP13.75□□□□□ -0.21
DDX54-202ENST00000314045 PIWIL4Q7Z3Z4 852 aaKnown RBP13.75□□□□□ -0.21
DDX54-202ENST00000314045 MILR1Q7Z6M3 343 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 NQO1P15559 274 aaKnown RBP13.75□□□□□ -0.21
DDX54-202ENST00000314045 NMBRP28336 390 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 SKIV2L2P42285 1042 aaKnown RBP13.75□□□□□ -0.21
DDX54-202ENST00000314045 GPR1P46091 355 aa13.75□□□□□ -0.21
DDX54-202ENST00000314045 RPL14P50914 215 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms