RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 COLGALT1Q8NBJ5 622 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 ZNF669Q96BR6 464 aaPredicted RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 SNX25Q9H3E2 840 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 DNMT3BQ9UBC3 853 aaKnown RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 ZNF229Q9UJW7 825 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 SLCO1B7G3V0H7 640 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 MT-CO1P00395 513 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 EIF2S1P05198 315 aaKnown RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 KRT19P08727 400 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 MBL2P11226 248 aaPredicted RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 IL10P22301 178 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 AVPR1AP37288 418 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 ASPAP45381 313 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 KRT76Q01546 638 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 CLCQ05315 142 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 CYBRD1Q53TN4 286 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 C4orf22Q6V702 233 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 DDIASQ8IXT1 998 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 HMGCLL1Q8TB92 370 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 MCRS1Q96EZ8 462 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 DUS3LQ96G46 650 aaKnown RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 RPL10LQ96L21 214 aaKnown RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 OMDQ99983 421 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 SNRNP25Q9BV90 132 aaKnown RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 DGCR6LQ9BY27 220 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 ADNPQ9H2P0 1102 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 NOL6Q9H6R4 1146 aaKnown RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 CCM2LQ9NUG4 571 aaPredicted RBP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.17■□□□□ 0.5
SPSB4-201ENST00000310546 SEPT10Q9P0V9 454 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 MORF4L1Q9UBU8 362 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 STYXL1Q9Y6J8 313 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 ADGRA2Q96PE1 1338 aa18.17■□□□□ 0.5
SPSB4-201ENST00000310546 C2CD4BA6NLJ0 364 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 AURKAO14965 403 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 MSI1O43347 362 aaKnown RBP18.16■□□□□ 0.5
SPSB4-201ENST00000310546 USP12O75317 370 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 SRP72O76094 671 aaKnown RBP18.16■□□□□ 0.5
SPSB4-201ENST00000310546 EDN1P05305 212 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 MZF1P28698 734 aaPredicted RBP18.16■□□□□ 0.5
SPSB4-201ENST00000310546 GJC2Q5T442 439 aaPredicted RBP18.16■□□□□ 0.5
SPSB4-201ENST00000310546 COLGALT2Q8IYK4 626 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 KIAA2013Q8IYS2 634 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 ZFP90Q8TF47 636 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 SLC10A4Q96EP9 437 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 LGMNQ99538 433 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 CD320Q9NPF0 282 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 AGPAT4Q9NRZ5 378 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 SMPD3Q9NY59 655 aaPredicted RBP18.16■□□□□ 0.5
SPSB4-201ENST00000310546 SDHDO14521 159 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 SEC14L2O76054 403 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 CPNE6O95741 557 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 MT-ND1P03886 318 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 PSMA4P25789 261 aaKnown RBP18.16■□□□□ 0.5
SPSB4-201ENST00000310546 OXTRP30559 389 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 MPP1Q00013 466 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 NAB1Q13506 487 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 PPP1R3AQ16821 1122 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 CRTC3Q6UUV7 619 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 CLEC14AQ86T13 490 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 SPATA6LQ8N4H0 392 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 SGCDQ92629 289 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 SEZ6LQ9BYH1 1024 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 GPN2Q9H9Y4 310 aaPredicted RBP18.16■□□□□ 0.5
SPSB4-201ENST00000310546 TLK1Q9UKI8 766 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 PCDHGA3Q9Y5H0 932 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 H0YCG3 227 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 RSL1D1O76021 490 aaKnown RBP18.16■□□□□ 0.5
SPSB4-201ENST00000310546 MPOP05164 745 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 HNRNPLP14866 589 aaKnown RBP eCLIP18.16■□□□□ 0.5
SPSB4-201ENST00000310546 TGM1P22735 817 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 HNRNPFP52597 415 aaKnown RBP18.16■□□□□ 0.5
SPSB4-201ENST00000310546 PLA2G16P53816 162 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 TSPY1Q01534 308 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 IFITM2Q01629 132 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 ZIK1Q3SY52 487 aaPredicted RBP18.16■□□□□ 0.5
SPSB4-201ENST00000310546 BOLA3Q53S33 107 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 CCNYL2Q5T2Q4 361 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 ZNF773Q6PK81 442 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 ZYG11AQ6WRX3 759 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 CYP2U1Q7Z449 544 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 HDAC10Q969S8 669 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 OSBPL10Q9BXB5 764 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 SPATC1LQ9H0A9 340 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 ING2Q9H160 280 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 TMEM181Q9P2C4 612 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 HMGXB4Q9UGU5 601 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 PPP2R3BQ9Y5P8 575 aa18.16■□□□□ 0.5
SPSB4-201ENST00000310546 WDR90Q96KV7 1748 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 NOTOA8MTQ0 251 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 GUCY1B2O75343 617 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 MICAL2O94851 1124 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 PTPN2P17706 415 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 CCND2P30279 289 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 AQP6Q13520 282 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 LY6KQ17RY6 165 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 USP43Q70EL4 1123 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 ERO1BQ86YB8 467 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 KDM1BQ8NB78 822 aa18.15■□□□□ 0.5
SPSB4-201ENST00000310546 CENPNQ96H22 339 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms