RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CACNA1HO95180 2353 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 PHF2O75151 1096 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 PGLSO95336 258 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 PIGNO95427 931 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 GAS8O95995 478 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 GKP32189 559 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 CD86P42081 329 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 GEMP55040 296 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 RPL6Q02878 288 aaKnown RBP18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 SIM2Q14190 667 aaPredicted RBP18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 UGP2Q16851 508 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 PARP6Q2NL67 630 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 GSTA5Q7RTV2 222 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 TTC7BQ86TV6 843 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 OR14C36Q8NHC7 312 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 KIF18AQ8NI77 898 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 ATOH1Q92858 354 aaPredicted RBP18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 VOPP1Q96AW1 172 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 ARRDC3Q96B67 414 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 LOXL4Q96JB6 756 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 TDRD1Q9BXT4 1180 aaKnown RBP18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 CEP41Q9BYV8 373 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 EPC1Q9H2F5 836 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 PAK5Q9P286 719 aa18.05■□□□□ 0.48
SSSCA1-201ENST00000309328 ERI2A8K979 691 aaKnown RBP18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 ZNF185O15231 689 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 PSMD3O43242 534 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 CPP00450 1065 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 NFKB1P19838 968 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 CD68P34810 354 aaPredicted RBP18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 FDFT1P37268 417 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 EPHB1P54762 984 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 SKOR1P84550 965 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 CKAP4Q07065 602 aaKnown RBP18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 NIPAL4Q0D2K0 466 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 SNX1Q13596 522 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 POM121L1PQ3SYA9 428 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 SYCP2LQ5T4T6 812 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 PMS2CLQ68D20 193 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 KIAA1161Q6NSJ0 714 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 USP45Q70EL2 814 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 CCHCR1Q8TD31 782 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 RLN3Q8WXF3 142 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 IFT43Q96FT9 208 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 FEM1CQ96JP0 617 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 PCDH9Q9HC56 1237 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 SERGEFQ9UGK8 458 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 PCDHB9Q9Y5E1 797 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 PCDHGC4Q9Y5F7 938 aa18.04■□□□□ 0.48
SSSCA1-201ENST00000309328 WDFY4Q6ZS81 3184 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 NEMP1O14524 444 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 AREL1O15033 823 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 HRO43593 1189 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 FZD6O60353 706 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 IFNB1P01574 187 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 MMP2P08253 660 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 CYP2A6P11509 494 aaPredicted RBP18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 HOXD12P35452 270 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 NBL1P41271 181 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 GRIA4P48058 902 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 CCR5P51681 352 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 TRAF2Q12933 501 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 WDR45BQ5MNZ6 344 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 CCDC137Q6PK04 289 aaKnown RBP18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 B4GALNT4Q76KP1 1039 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 PRPF39Q86UA1 669 aaKnown RBP18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 FAM124AQ86V42 546 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 TRIM69Q86WT6 500 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 RAVER1Q8IY67 606 aaKnown RBP18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 CCDC110Q8TBZ0 833 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 PDCD6IPQ8WUM4 868 aaKnown RBP18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 CAPZA3Q96KX2 299 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 RBM15Q96T37 977 aaKnown RBP eCLIP18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 GPR174Q9BXC1 333 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 FSD1LQ9BXM9 530 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 AP1M1Q9BXS5 423 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 KCTD5Q9NXV2 234 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 MBD1Q9UIS9 605 aaPredicted RBP18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 PPIL1Q9Y3C6 166 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 FADS3Q9Y5Q0 445 aa18.03■□□□□ 0.48
SSSCA1-201ENST00000309328 FANCGO15287 622 aa18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 TIMP2P16035 220 aa18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 HLA-DPA1P20036 260 aa18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 ACSL1P33121 698 aa18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 COILP38432 576 aaPredicted RBP18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 RPS21P63220 83 aaKnown RBP18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 CDK18Q07002 472 aa18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 PLK5Q496M5 336 aa18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 SYDE1Q6ZW31 735 aaPredicted RBP18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 RABEPKQ7Z6M1 372 aa18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 KLHDC8BQ8IXV7 354 aa18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 SLCO2A1Q92959 643 aa18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 C10orf88Q9H8K7 445 aa18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 CDC23Q9UJX2 597 aa18.02■□□□□ 0.48
SSSCA1-201ENST00000309328 TBC1D3DA0A087WVF3 549 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 TBC1D3IA0A087WXS9 549 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 TBC1D3EA0A087X179 549 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 TBC1D3KA0A087X1G2 549 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 TBC1D3FA6NER0 549 aaPredicted RBP18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 TBC1D3LB9A6J9 549 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms