RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 VTI1BQ9UEU0 232 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 MID2Q9UJV3 735 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 FBXO5Q9UKT4 447 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 PLXNA1Q9UIW2 1896 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 NR5A2O00482 541 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 PTGESO14684 152 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 CD4P01730 458 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 APOA4P06727 396 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 DARSP14868 501 aaKnown RBP16.71■□□□□ 0.27
SSH3-201ENST00000308127 CPB1P15086 417 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 ARCN1P48444 511 aaKnown RBP16.71■□□□□ 0.27
SSH3-201ENST00000308127 ITKQ08881 620 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 FAM83EQ2M2I3 478 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 ZBTB49Q6ZSB9 765 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 BNIPLQ7Z465 357 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 SETD3Q86TU7 594 aaPredicted RBP16.71■□□□□ 0.27
SSH3-201ENST00000308127 LCA5Q86VQ0 697 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 ERO1BQ86YB8 467 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 ZNF786Q8N393 782 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 C3orf58Q8NDZ4 430 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 GAB3Q8WWW8 586 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 DCPSQ96C86 337 aaKnown RBP16.71■□□□□ 0.27
SSH3-201ENST00000308127 DTNBP1Q96EV8 351 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 SENP8Q96LD8 212 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 ARHGEF38Q9NXL2 777 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 NDUFA13Q9P0J0 144 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 EBF1Q9UH73 591 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 CRYL1Q9Y2S2 319 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 SIX3O95343 332 aaPredicted RBP16.71■□□□□ 0.26
SSH3-201ENST00000308127 HLA-DQB2P05538 268 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 TFPTP0C1Z6 253 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 SCNN1AP37088 669 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 CD151P48509 253 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 NR1H2P55055 460 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 LRP8Q14114 963 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 KIF19Q2TAC6 998 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 PCID2Q5JVF3 399 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 C6orf10Q5SRN2 563 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 CHSY3Q70JA7 882 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 SPPL2CQ8IUH8 684 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 OFCC1Q8IZS5 231 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 ATPAF2Q8N5M1 289 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 CATSPER1Q8NEC5 780 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 OR52K2Q8NGK3 314 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 KCNA7Q96RP8 456 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 EPB41L1Q9H4G0 881 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 IGSF5Q9NSI5 407 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 GDAP2Q9NXN4 497 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 ANKRD6Q9Y2G4 727 aa16.71■□□□□ 0.26
SSH3-201ENST00000308127 TNS1Q9HBL0 1735 aaKnown RBP16.7■□□□□ 0.26
SSH3-201ENST00000308127 STRNO43815 780 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 GJB3O75712 270 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 SMIM10L2AP0DMW4 78 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 SMIM10L2BP0DMW5 78 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 BDNFP23560 247 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 IREB2P48200 963 aaKnown RBP16.7■□□□□ 0.26
SSH3-201ENST00000308127 APLP1P51693 650 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 ARL13BQ3SXY8 428 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 VPS26BQ4G0F5 336 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 GPR158Q5T848 1215 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 RETREG3Q86VR2 466 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 OR6P1Q8NGX9 317 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 OLAHQ9NV23 265 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 RBM22Q9NW64 420 aaKnown RBP eCLIP16.7■□□□□ 0.264e-7■■■□□ 15.9
SSH3-201ENST00000308127 DERAQ9Y315 318 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 KCTD3Q9Y597 815 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 MAGEB16A2A368 324 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 SNX17Q15036 470 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 UBXN11Q5T124 520 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 DPP9Q86TI2 863 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 PELI3Q8N2H9 469 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 SMG8Q8ND04 991 aaKnown RBP16.7■□□□□ 0.26
SSH3-201ENST00000308127 PPHLN1Q8NEY8 458 aaKnown RBP16.7■□□□□ 0.26
SSH3-201ENST00000308127 DLG3Q92796 817 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 EMID1Q96A84 441 aaPredicted RBP16.7■□□□□ 0.26
SSH3-201ENST00000308127 KLHL5Q96PQ7 755 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 SLC39A8Q9C0K1 460 aa16.7■□□□□ 0.26
SSH3-201ENST00000308127 HTRA2O43464 458 aaPredicted RBP16.69■□□□□ 0.26
SSH3-201ENST00000308127 CSRP3P50461 194 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 CLCNKBP51801 687 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 ADARP55265 1226 aaKnown RBP16.69■□□□□ 0.26
SSH3-201ENST00000308127 NEPROQ6NW34 567 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 TFAP2DQ7Z6R9 452 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 ZNF354CQ86Y25 554 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 CLVS1Q8IUQ0 354 aaPredicted RBP16.69■□□□□ 0.26
SSH3-201ENST00000308127 CBR4Q8N4T8 237 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 RDH11Q8TC12 318 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 UNC93B1Q9H1C4 597 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 BCAP29Q9UHQ4 241 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 TRHDEQ9UKU6 1024 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 TMCO1Q9UM00 188 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 ATP5F1P24539 256 aaPredicted RBP16.69■□□□□ 0.26
SSH3-201ENST00000308127 GJA5P36382 358 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 YAP1P46937 504 aaKnown RBP16.69■□□□□ 0.26
SSH3-201ENST00000308127 FOXA1P55317 472 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 CTBSQ01459 385 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 RHDQ02161 417 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 CYHR1Q6ZMK1 362 aa16.69■□□□□ 0.26
SSH3-201ENST00000308127 RMND5BQ96G75 393 aaPredicted RBP16.69■□□□□ 0.26
SSH3-201ENST00000308127 TMEM209Q96SK2 561 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms