RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 MTA1Q13330 715 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 FLOT2Q14254 428 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 MMEL1Q495T6 779 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 BRMS1LQ5PSV4 323 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 CST9Q5W186 159 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 GK5Q6ZS86 529 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 MRPL10Q7Z7H8 261 aaKnown RBP13□□□□□ -0.33
HIF3A-204ENST00000300862 RTL3Q8N8U3 475 aaKnown RBP13□□□□□ -0.33
HIF3A-204ENST00000300862 RP9Q8TA86 221 aaKnown RBP13□□□□□ -0.33
HIF3A-204ENST00000300862 SMOC2Q9H3U7 446 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 ZNF385DQ9H6B1 395 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 WDR41Q9HAD4 459 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 IGSF5Q9NSI5 407 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 LMCD1Q9NZU5 365 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 PHF24Q9UPV7 400 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 NYNRINQ9P2P1 1898 aaKnown RBP13□□□□□ -0.33
HIF3A-204ENST00000300862 FGF10O15520 208 aaPredicted RBP13□□□□□ -0.33
HIF3A-204ENST00000300862 DUSP11O75319 330 aaKnown RBP13□□□□□ -0.33
HIF3A-204ENST00000300862 CNTN5O94779 1100 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 CYP11A1P05108 521 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 COL6A2P12110 1019 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 CYP2C18P33260 490 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 DSC2Q02487 901 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 ZNF33AQ06730 810 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 MGAT3Q09327 533 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 MED21Q13503 144 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 ART3Q13508 389 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 PPP1R3AQ16821 1122 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 ZNF423Q2M1K9 1284 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 FBXL19Q6PCT2 694 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 C16orf89Q6UX73 402 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 SATL1Q86VE3 508 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 THEM5Q8N1Q8 247 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 ANKRD49Q8WVL7 239 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 HMCESQ96FZ2 354 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 ZBTB26Q9HCK0 441 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 ATXN10Q9UBB4 475 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 KCTD3Q9Y597 815 aa13□□□□□ -0.33
HIF3A-204ENST00000300862 KCNU1A8MYU2 1149 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 M0QZQ0 153 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 SDHDO14521 159 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 CCDC166P0CW27 439 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 UQCRBP14927 111 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 PAMP19021 973 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 DNAJB2P25686 324 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 HOXC13P31276 330 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 GRK4P32298 578 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 ETFBP38117 255 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 ALDH1A3P47895 512 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 YWHAHQ04917 246 aaPredicted RBP12.99□□□□□ -0.33
HIF3A-204ENST00000300862 TRIM32Q13049 653 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 TUSC3Q13454 348 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 GPR162Q16538 588 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 ALFQ53S48 1182 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 PIGGQ5H8A4 983 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 SPATA24Q86W54 205 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 CIR1Q86X95 450 aaPredicted RBP12.99□□□□□ -0.33
HIF3A-204ENST00000300862 CPSF7Q8N684 471 aaKnown RBP12.99□□□□□ -0.33
HIF3A-204ENST00000300862 PCDH20Q8N6Y1 951 aaKnown RBP12.99□□□□□ -0.33
HIF3A-204ENST00000300862 BHLHE22Q8NFJ8 381 aaPredicted RBP12.99□□□□□ -0.33
HIF3A-204ENST00000300862 OR6P1Q8NGX9 317 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 MRPL57Q9BQC6 102 aaKnown RBP12.99□□□□□ -0.33
HIF3A-204ENST00000300862 NCKIPSDQ9NZQ3 722 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 VTI1BQ9UEU0 232 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 AK5Q9Y6K8 562 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 A0A0U1RQF3 1178 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 TCAF2A6NFQ2 919 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 PEX11BO96011 259 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 ARSDP51689 593 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 INHBCP55103 352 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 MLLT6P55198 1093 aaPredicted RBP12.99□□□□□ -0.33
HIF3A-204ENST00000300862 FKBP1BP68106 108 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 SULT2A1Q06520 285 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 PTPRCAPQ14761 206 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 KDELC1Q6UW63 502 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 PIM3Q86V86 326 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 ZNF280BQ86YH2 543 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 PQLC1Q8N2U9 271 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 LZTR1Q8N653 840 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 TTC9BQ8N6N2 239 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
HIF3A-204ENST00000300862 COPS7BQ9H9Q2 264 aaPredicted RBP12.99□□□□□ -0.33
HIF3A-204ENST00000300862 PCDHGB4Q9UN71 923 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 PCDHGB5Q9Y5G0 923 aa12.99□□□□□ -0.33
HIF3A-204ENST00000300862 TRPM7Q96QT4 1865 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 SOAT2O75908 522 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 HMBSP08397 361 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 ATP5F1P24539 256 aaPredicted RBP12.98□□□□□ -0.33
HIF3A-204ENST00000300862 ZNF157P51786 506 aaPredicted RBP12.98□□□□□ -0.33
HIF3A-204ENST00000300862 C1QTNF8P60827 252 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 USP46P62068 366 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 LPIN1Q14693 890 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 KIAA0930Q6ICG6 404 aaPredicted RBP12.98□□□□□ -0.33
HIF3A-204ENST00000300862 TIGD7Q6NT04 549 aaPredicted RBP12.98□□□□□ -0.33
HIF3A-204ENST00000300862 C17orf99Q6UX52 265 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 MIB1Q86YT6 1006 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 PSMG2Q969U7 264 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 SERPINI1Q99574 410 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 CLIC5Q9NZA1 410 aa12.98□□□□□ -0.33
HIF3A-204ENST00000300862 PRPF19Q9UMS4 504 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms