RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 SCML4Q8N228 414 aa13.73□□□□□ -0.21
BCCIP-202ENST00000299130 BTBD9Q96Q07 612 aa13.73□□□□□ -0.21
BCCIP-202ENST00000299130 TRIM4Q9C037 500 aa13.73□□□□□ -0.21
BCCIP-202ENST00000299130 SMOC2Q9H3U7 446 aa13.73□□□□□ -0.21
BCCIP-202ENST00000299130 MRM3Q9HC36 420 aaKnown RBP13.73□□□□□ -0.21
BCCIP-202ENST00000299130 SPON1Q9HCB6 807 aa13.73□□□□□ -0.21
BCCIP-202ENST00000299130 ABCC13Q9NSE7 274 aa13.73□□□□□ -0.21
BCCIP-202ENST00000299130 IPO11Q9UI26 975 aaKnown RBP13.73□□□□□ -0.21
BCCIP-202ENST00000299130 PCDHGA7Q9Y5G6 932 aa13.73□□□□□ -0.21
BCCIP-202ENST00000299130 PTPRDP23468 1912 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 OR51F1A6NGY5 319 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 FBP2O00757 339 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 FGF10O15520 208 aaPredicted RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 GJB3O75712 270 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 RNASEH2AO75792 299 aaKnown RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 BCAS2O75934 225 aaPredicted RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 MT-CO1P00395 513 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 CYP11A1P05108 521 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 CCDC166P0CW27 439 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 DNAJB1P25685 340 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 PMLP29590 882 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 ADSLP30566 484 aaPredicted RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 POLD2P49005 469 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 DNAJB13P59910 316 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 CDKL1Q00532 357 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 PFKPQ01813 784 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 CACNB2Q08289 660 aaPredicted RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 GNASQ5JWF2 1037 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 PIK3R6Q5UE93 754 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 OVOS1Q6IE37 1185 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 PTAR1Q7Z6K3 402 aaPredicted RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 MRPL10Q7Z7H8 261 aaKnown RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 MFN1Q8IWA4 741 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 CCDC117Q8IWD4 279 aaPredicted RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 RTL3Q8N8U3 475 aaKnown RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 OR13J1Q8NGT2 312 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 CEP70Q8NHQ1 597 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 RSPH1Q8WYR4 309 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 LRGUKQ96M69 825 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 SYT17Q9BSW7 474 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 PCDHAC1Q9H158 963 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 NT5MQ9NPB1 228 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 ADA2Q9NZK5 511 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 KCTD3Q9Y597 815 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 PRSS51A0A1B0GVH4 220 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 E7ENX8 843 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 UBFD1O14562 309 aaKnown RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 HAPLN1P10915 354 aaPredicted RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 CD86P42081 329 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 GPR15P49685 360 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 ARSDP51689 593 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 DSC2Q02487 901 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 SLC10A7Q0GE19 358 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 PIWIL4Q7Z3Z4 852 aaKnown RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 GALNT4Q8N4A0 578 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 LZTR1Q8N653 840 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 PTCD2Q8WV60 388 aaKnown RBP13.72□□□□□ -0.21
BCCIP-202ENST00000299130 ZFAND2BQ8WV99 257 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 CENPKQ9BS16 269 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 ZCWPW1Q9H0M4 648 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 TRPC7Q9HCX4 862 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 PADI3Q9ULW8 664 aa13.72□□□□□ -0.21
BCCIP-202ENST00000299130 TRPC5OSA6NMA1 111 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 M0QZQ0 153 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 DENRO43583 198 aaKnown RBP13.71□□□□□ -0.21
BCCIP-202ENST00000299130 B4GALT3O60512 393 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 CNTN5O94779 1100 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 MMP2P08253 660 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 PAMP19021 973 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 CDKN2DP55273 166 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 ITKQ08881 620 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 MGAT3Q09327 533 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 RFTN1Q14699 578 aaPredicted RBP13.71□□□□□ -0.21
BCCIP-202ENST00000299130 C6orf52Q5T4I8 152 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 CLEC6AQ6EIG7 209 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 PAOXQ6QHF9 649 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 CYHR1Q6ZMK1 362 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 CHSY3Q70JA7 882 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 CUZD1Q86UP6 607 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 PIM3Q86V86 326 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 SPATA24Q86W54 205 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 SCN4BQ8IWT1 228 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 MARVELD2Q8N4S9 558 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 STON2Q8WXE9 905 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 ATP6V1E2Q96A05 226 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 HMCESQ96FZ2 354 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 SH3GL3Q99963 347 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 CCDC167Q9P0B6 97 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 MARCH4Q9P2E8 410 aaPredicted RBP13.71□□□□□ -0.21
BCCIP-202ENST00000299130 GMPR2Q9P2T1 348 aaKnown RBP13.71□□□□□ -0.21
BCCIP-202ENST00000299130 Q9Y3F1 56 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 AP4B1Q9Y6B7 739 aa13.71□□□□□ -0.21
BCCIP-202ENST00000299130 IPO13O94829 963 aaKnown RBP13.7□□□□□ -0.22
BCCIP-202ENST00000299130 LTA4HP09960 611 aaKnown RBP13.7□□□□□ -0.22
BCCIP-202ENST00000299130 HSPA1AP0DMV8 641 aaKnown RBP13.7□□□□□ -0.22
BCCIP-202ENST00000299130 HSPA1BP0DMV9 641 aaKnown RBP13.7□□□□□ -0.22
BCCIP-202ENST00000299130 YWHAQP27348 245 aa13.7□□□□□ -0.22
BCCIP-202ENST00000299130 MLLT6P55198 1093 aaPredicted RBP13.7□□□□□ -0.22
BCCIP-202ENST00000299130 PSME3P61289 254 aa13.7□□□□□ -0.22
BCCIP-202ENST00000299130 RALGDSQ12967 914 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms