RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 DDIT4Q9NX09 232 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 IPPQ9Y573 584 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 TRIP12Q14669 1992 aaPredicted RBP15.73■□□□□ 0.11
UBAP1-201ENST00000297661 RGSL1A5PLK6 1076 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 TK2O00142 265 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 CSPG5O95196 566 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 ATE1O95260 518 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 TCN1P20061 433 aaPredicted RBP15.73■□□□□ 0.11
UBAP1-201ENST00000297661 CDH3P22223 829 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 ZBED5Q49AG3 693 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 UBXN11Q5T124 520 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 SMYD5Q6GMV2 418 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 C16orf87Q6PH81 154 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 DCLRE1AQ6PJP8 1040 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 KDELC2Q7Z4H8 507 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 ARL10Q8N8L6 244 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 ZSCAN18Q8TBC5 510 aaPredicted RBP15.73■□□□□ 0.11
UBAP1-201ENST00000297661 HM13Q8TCT9 377 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 RCN3Q96D15 328 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 ITPKCQ96DU7 683 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 CPNE1Q99829 537 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 HIPK3Q9H422 1215 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 EIF2B3Q9NR50 452 aaKnown RBP15.73■□□□□ 0.11
UBAP1-201ENST00000297661 GDAP2Q9NXN4 497 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 VPS28Q9UK41 221 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 CDH7Q9ULB5 785 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 STAP1Q9ULZ2 295 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 TMEM98Q9Y2Y6 226 aa15.73■□□□□ 0.11
UBAP1-201ENST00000297661 PLOD2O00469 737 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 C2P06681 752 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 MX2P20592 715 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 FGFR3P22607 806 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 MPSTP25325 297 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 NMBRP28336 390 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 GARSP41250 739 aaKnown RBP15.72■□□□□ 0.11
UBAP1-201ENST00000297661 DPP6P42658 865 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 ZNF460Q14592 562 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 OTOP3Q7RTS5 596 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 PSTKQ8IV42 348 aaKnown RBP15.72■□□□□ 0.11
UBAP1-201ENST00000297661 FAM156AQ8NDB6 213 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 ATP6V1E2Q96A05 226 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 MARK4Q96L34 752 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 LRRC40Q9H9A6 602 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 CRTAC1Q9NQ79 661 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 TCF7L2Q9NQB0 619 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 BFARQ9NZS9 450 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 TSC22D4Q9Y3Q8 395 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 CROCCQ5TZA2 2017 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 MYBPHLA2RUH7 354 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 SOBPA7XYQ1 873 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 G3V2L1 256 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 H0YJX3 145 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 BEX3Q00994 111 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 PAFAH1B3Q15102 231 aaKnown RBP15.72■□□□□ 0.11
UBAP1-201ENST00000297661 BCL2A1Q16548 175 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 SV2CQ496J9 727 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 SPANXN3Q5MJ09 141 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 GRTP1Q5TC63 336 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 FAM219BQ5XKK7 198 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 TWF2Q6IBS0 349 aaKnown RBP15.72■□□□□ 0.11
UBAP1-201ENST00000297661 PTAR1Q7Z6K3 402 aaPredicted RBP15.72■□□□□ 0.11
UBAP1-201ENST00000297661 TBC1D15Q8TC07 691 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 APBA2Q99767 749 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 TINF2Q9BSI4 451 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 CDH19Q9H159 772 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 SLC8A2Q9UPR5 921 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 CDY2AQ9Y6F7 541 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 CDY1Q9Y6F8 540 aa15.72■□□□□ 0.11
UBAP1-201ENST00000297661 NRCAMQ92823 1304 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 AP2A1O95782 977 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 JCHAINP01591 159 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 C8BP07358 591 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 UGT1A6P19224 532 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 UGT1A1P22309 533 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 UGT1A4P22310 534 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 GLDCP23378 1020 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 UGT1A3P35503 534 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 UGT1A5P35504 534 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 EIF2B2P49770 351 aaKnown RBP15.71■□□□□ 0.11
UBAP1-201ENST00000297661 LIMK2P53671 638 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 PAN2Q504Q3 1202 aaKnown RBP15.71■□□□□ 0.11
UBAP1-201ENST00000297661 METTL21CQ5VZV1 264 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 DNAJC14Q6Y2X3 702 aaPredicted RBP15.71■□□□□ 0.11
UBAP1-201ENST00000297661 ARHGAP36Q6ZRI8 547 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 KCNMB4Q86W47 210 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 SMG8Q8ND04 991 aaKnown RBP15.71■□□□□ 0.11
UBAP1-201ENST00000297661 SPATA22Q8NHS9 363 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 URGCPQ8TCY9 931 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 SOCS4Q8WXH5 440 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 NT5C3BQ969T7 300 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 WDR41Q9HAD4 459 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 WDR6Q9NNW5 1121 aaKnown RBP15.71■□□□□ 0.11
UBAP1-201ENST00000297661 RCOR3Q9P2K3 495 aaPredicted RBP15.71■□□□□ 0.11
UBAP1-201ENST00000297661 ZNF701M0R085 212 aaPredicted RBP15.71■□□□□ 0.11
UBAP1-201ENST00000297661 PTGESO14684 152 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 ACOT8O14734 319 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 SPRP35270 261 aaPredicted RBP15.71■□□□□ 0.11
UBAP1-201ENST00000297661 SCNN1AP37088 669 aa15.71■□□□□ 0.11
UBAP1-201ENST00000297661 COL13A1Q5TAT6 717 aaPredicted RBP15.71■□□□□ 0.11
UBAP1-201ENST00000297661 NIPAL1Q6NVV3 410 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms