RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 SSR3Q9UNL2 185 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 PCDHB7Q9Y5E2 793 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 A0A0J9YYE9 177 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 TCRBV7S2A1N4TA0A589 114 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 CCDC162PA2VCL2 907 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 TCEA3O75764 348 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 MTA2O94776 668 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 FARP2O94887 1054 aaPredicted RBP11.1□□□□□ -0.63
PBRM1-201ENST00000296302 FGRP09769 529 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 UMPSP11172 480 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 CETPP11597 493 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 TYMPP19971 482 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 CYP2B6P20813 491 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 MPSTP25325 297 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 NDUFAF6Q330K2 333 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 ZC3H12AQ5D1E8 599 aaKnown RBP11.1□□□□□ -0.63
PBRM1-201ENST00000296302 PAGE2BQ5JRK9 111 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 ARMC6Q6NXE6 501 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 PMF1Q6P1K2 205 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 GALNT18Q6P9A2 607 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 VN1R5Q7Z5H4 357 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 SATL1Q86VE3 508 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 LPGAT1Q92604 370 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 YIPF2Q9BWQ6 316 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 UNC93B1Q9H1C4 597 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 LHX5Q9H2C1 402 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.1□□□□□ -0.63
PBRM1-201ENST00000296302 RNF181Q9P0P0 153 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 BTRCQ9Y297 605 aa11.1□□□□□ -0.63
PBRM1-201ENST00000296302 ATP6AP2A0A1C7CYW4 349 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 ATP6AP2O75787 350 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 OTCP00480 354 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 MSX2P35548 267 aaPredicted RBP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 ITGA7Q13683 1181 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 TYSND1Q2T9J0 566 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 ZFP69Q49AA0 526 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 RNASEH2BQ5TBB1 312 aaKnown RBP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 PRAMEF18Q5VWM3 479 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 GK5Q6ZS86 529 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 SPATA19Q7Z5L4 167 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 MRPS31Q92665 395 aaKnown RBP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 SLC47A1Q96FL8 570 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 SERAC1Q96JX3 654 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 MAGEB10Q96LZ2 347 aaPredicted RBP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 WDR18Q9BV38 432 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 TAS2R1Q9NYW7 299 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 TNFSF13BQ9Y275 285 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 CLDN25C9JDP6 229 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 LOC110117498-PIK3R3F6TDL0 507 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 IFRD1O00458 451 aaPredicted RBP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 MYCP01106 439 aaPredicted RBP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 FYNP06241 537 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 PBLDP30039 288 aaPredicted RBP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 RFX3P48380 749 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 ECM1Q16610 540 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 ARHGAP15Q53QZ3 475 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 SIX5Q8N196 739 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 HELQQ8TDG4 1101 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 NELL1Q92832 810 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 EBF3Q9H4W6 596 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 DDX4Q9NQI0 724 aaKnown RBP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 ABCC13Q9NSE7 274 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 KCNH4Q9UQ05 1017 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 PCDHB5Q9Y5E4 795 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 SNCAIPQ9Y6H5 919 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 WASF2Q9Y6W5 498 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 SPATA31D1Q6ZQQ2 1576 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 NKRFO15226 690 aaKnown RBP eCLIP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 ALDH1A2O94788 518 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 LRIG2O94898 1065 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 GPIP06744 558 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 CAPGP40121 348 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 CRATP43155 626 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 ACLYP53396 1101 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 ACSBG2Q5FVE4 666 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 BICRALQ6AI39 1079 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 AFTPHQ6ULP2 937 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 KLHL32Q96NJ5 620 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 LGMNQ99538 433 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 PCDH18Q9HCL0 1135 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 FAM53CQ9NYF3 392 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 PRKAG3Q9UGI9 489 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 UBIAD1Q9Y5Z9 338 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 UBE2QL1A1L167 161 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 USP17L7P0C7H9 530 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 GOT1P17174 413 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 THPOP40225 353 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 TTPAP49638 278 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 AQP4P55087 323 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 BOP1Q14137 746 aaKnown RBP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 GRIK4Q16099 956 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 CYP1B1Q16678 543 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 PAN2Q504Q3 1202 aaKnown RBP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 FNBP1LQ5T0N5 605 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 ADAMTSL2Q86TH1 951 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 CDYL2Q8N8U2 506 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 OR2T12Q8NG77 320 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 CD101Q93033 1021 aa11.09□□□□□ -0.63
PBRM1-201ENST00000296302 CENPNQ96H22 339 aaPredicted RBP11.09□□□□□ -0.63
PBRM1-201ENST00000296302 STON1Q9Y6Q2 735 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms