RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 STMN1P16949 149 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 LEPRP48357 1165 aaKnown RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 DAOAP59103 153 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ATP6V0D1P61421 351 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 USP46P62068 366 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 GRSF1Q12849 480 aaKnown RBP eCLIP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CBX2Q14781 532 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 GRM3Q14832 879 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ACAP2Q15057 778 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 TECRLQ5HYJ1 363 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 SYCP2LQ5T4T6 812 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ACBD5Q5T8D3 534 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 LCN8Q6JVE9 175 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 TSPAN14Q8NG11 270 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 OR6B3Q8NGW1 331 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CLEC4CQ8WTT0 213 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CPB2Q96IY4 423 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 FEM1CQ96JP0 617 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 TASP1Q9H6P5 420 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CLK4Q9HAZ1 481 aaKnown RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 C20orf96Q9NUD7 363 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CCM2LQ9NUG4 571 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 RBPJLQ9UBG7 517 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ZNF639Q9UID6 485 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 RNF11Q9Y3C5 154 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 A0A087WXM4 84 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 AIM2O14862 343 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ZBTB24O43167 697 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 RNASEH2AO75792 299 aaKnown RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 SORBS2O94875 1100 aaKnown RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 FYNP06241 537 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 SNRPB2P08579 225 aaKnown RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 UMPSP11172 480 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 IDO1P14902 403 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 PSMA3P25788 255 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 SLC5A2P31639 672 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 GEMP55040 296 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 IRF9Q00978 393 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ITGA7Q13683 1181 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 MYBPC3Q14896 1274 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ZBED5Q49AG3 693 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 BRMS1LQ5PSV4 323 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 MANEALQ5VSG8 457 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 TIGD7Q6NT04 549 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 PAQR9Q6ZVX9 377 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ERMP1Q7Z2K6 904 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 PTRH1Q86Y79 214 aaKnown RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 PYROXD2Q8N2H3 581 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 TRAPPC12Q8WVT3 735 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CCDC124Q96CT7 223 aaKnown RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 AGAP2Q99490 1192 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 OXCT2Q9BYC2 517 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 NUF2Q9BZD4 464 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 PIGVQ9NUD9 493 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 OLAHQ9NV23 265 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ZNF358Q9NW07 568 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ARHGEF38Q9NXL2 777 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 SLC17A6Q9P2U8 582 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 NEU3Q9UQ49 428 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 AKT3Q9Y243 479 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 NDUFAF1Q9Y375 327 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 MTF2Q9Y483 593 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 TCAF1Q9Y4C2 921 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 MFHAS1Q9Y4C4 1052 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 GREB1Q4ZG55 1949 aa6.21□□□□□ -1.41
VCAM1-201ENST00000294728 NYNRINQ9P2P1 1898 aaKnown RBP6.21□□□□□ -1.41
VCAM1-201ENST00000294728 M0QYT0 321 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 AHSGP02765 367 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 GPIP06744 558 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 CHRNGP07510 517 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 DARSP14868 501 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 GABRB3P28472 473 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 TKTP29401 623 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 LHX1P48742 406 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 SUOXP51687 545 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 ATXN1P54253 815 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 TPI1P60174 286 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 CRADDP78560 199 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 MRPS22P82650 360 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 CDKL1Q00532 357 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 PPP2R5DQ14738 602 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 C6orf10Q5SRN2 563 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 AGAP9Q5VTM2 703 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 IL23RQ5VWK5 629 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 DENND5AQ6IQ26 1287 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 CLEC20AQ6ZU45 233 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 LARP4Q71RC2 724 aaKnown RBP eCLIP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 BHLHA9Q7RTU4 235 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 SPRED1Q7Z699 444 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 FAM131BQ86XD5 332 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 GALNT13Q8IUC8 556 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 ZNF513Q8N8E2 541 aaPredicted RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 PCYOX1LQ8NBM8 494 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 PPHLN1Q8NEY8 458 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 HMGCLL1Q8TB92 370 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 SLC2A14Q8TDB8 520 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 USP33Q8TEY7 942 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 SLCO4A1Q96BD0 722 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 TADA1Q96BN2 335 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms