RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 TANGO2Q6ICL3 276 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 ESRP1Q6NXG1 681 aaKnown RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 KCNMB4Q86W47 210 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 RASSF3Q86WH2 238 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 BRSK1Q8TDC3 778 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 CPNE1Q99829 537 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 ADGRE3Q9BY15 652 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 ZMYND15Q9H091 742 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 SSU72Q9NP77 194 aaKnown RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 C20orf96Q9NUD7 363 aaPredicted RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 SLC27A6Q9Y2P4 619 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 PCDHGC4Q9Y5F7 938 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 MTCH2Q9Y6C9 303 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 TRIOBPQ9H2D6 2365 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 LDB2O43679 373 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 FZD6O60353 706 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 IGSF6O95976 241 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 ARSAP15289 507 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 MDH1P40925 334 aaKnown RBP14.21□□□□□ -0.13
SS18-201ENST00000269137 MTHFRP42898 656 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 SLC18A1P54219 525 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 DLX2Q07687 328 aaPredicted RBP14.21□□□□□ -0.13
SS18-201ENST00000269137 DNAJC3Q13217 504 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 SEPT6Q14141 434 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 GALNT3Q14435 633 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 HSP90AA5PQ58FG0 334 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 MBLAC2Q68D91 279 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 PACS1Q6VY07 963 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 MFSD6LQ8IWD5 586 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 CNTN4Q8IWV2 1026 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 ETFBKMTQ8IXQ9 262 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 NAT16Q8N8M0 369 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 OR2AP1Q8NGE2 309 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 WFIKKN2Q8TEU8 576 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 RPL10LQ96L21 214 aaKnown RBP14.21□□□□□ -0.13
SS18-201ENST00000269137 MYADMQ96S97 322 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 SMC6Q96SB8 1091 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 TM6SF2Q9BZW4 377 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 NSMCE4AQ9NXX6 385 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 PRDM4Q9UKN5 801 aa14.21□□□□□ -0.13
SS18-201ENST00000269137 A0A1W2PPM1 405 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 ANKRD66B4E2M5 251 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 PRPF4O43172 522 aaKnown RBP eCLIP14.2□□□□□ -0.14
SS18-201ENST00000269137 SHOX2O60902 331 aaPredicted RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 SOCS5O75159 536 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 SIN3BO75182 1162 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 GSRP00390 522 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 MT-ND3P03897 115 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 PDHA1P08559 390 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 POLR2EP19388 210 aaKnown RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 ARNTP27540 789 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 LTBRP36941 435 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 GP5P40197 560 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 DGKGP49619 791 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 STK19P49842 368 aaPredicted RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 RPL26P61254 145 aaKnown RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 SNRPD1P62314 119 aaKnown RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 CNGA3Q16281 694 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 GRTP1Q5TC63 336 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 TMEM215Q68D42 235 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 C22orf39Q6P5X5 142 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 VITQ6UXI7 678 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 TIFABQ6ZNK6 161 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 PLPP6Q8IY26 295 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 PCDH20Q8N6Y1 951 aaKnown RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 CENPTQ96BT3 561 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 ALKBH8Q96BT7 664 aaKnown RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 SELENOSQ9BQE4 189 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 CAPS2Q9BXY5 557 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 TTYH1Q9H313 450 aaPredicted RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 EBF3Q9H4W6 596 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 ECT2Q9H8V3 914 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 CLDND1Q9NY35 253 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 IL1RAPL1Q9NZN1 696 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 SLC2A6Q9UGQ3 507 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 RPL26L1Q9UNX3 145 aaKnown RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 SMG5Q9UPR3 1016 aaKnown RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 PSAT1Q9Y617 370 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 TMEM120BA0PK00 339 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 HMX2A2RU54 273 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 TRIM49D1C9J1S8 452 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 TRIM24O15164 1050 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 HTRA2O43464 458 aaPredicted RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 TULP3O75386 442 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 VAPBO95292 243 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 LAMP2P13473 410 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 KRT4P19013 534 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 PSMA3P25788 255 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 ACVR1Q04771 509 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 GEN1Q17RS7 908 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 GAB4Q2WGN9 574 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 SH2D5Q6ZV89 423 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 OR13J1Q8NGT2 312 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 MDM1Q8TC05 714 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 BLOC1S5Q8TDH9 187 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 ELSPBP1Q96BH3 223 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 RMDN1Q96DB5 314 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 ZFYVE19Q96K21 471 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 MSLNLQ96KJ4 702 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 HPS4Q9NQG7 708 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms