RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 POMKQ9H5K3 350 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 ECT2Q9H8V3 914 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 SENP1Q9P0U3 644 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 SLC17A6Q9P2U8 582 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 SLC27A6Q9Y2P4 619 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 ANKRD36A6QL64 1941 aa23.07■■□□□ 1.28
SMARCB1-201ENST00000263121 CCDC78A2IDD5 438 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 OTOL1A6NHN0 477 aaPredicted RBP23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 FZD6O60353 706 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 PAPSS2O95340 614 aaPredicted RBP23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 IGSF6O95976 241 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 PDHA1P08559 390 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 CREB1P16220 341 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 TSTD2Q5T7W7 516 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 PDPK2PQ6A1A2 396 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 KCNMB4Q86W47 210 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 SRRM1Q8IYB3 904 aaKnown RBP23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 OR2AP1Q8NGE2 309 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 WFIKKN2Q8TEU8 576 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 ELSPBP1Q96BH3 223 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 PLA2G2FQ9BZM2 168 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 TNKS2Q9H2K2 1166 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 C20orf96Q9NUD7 363 aaPredicted RBP23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 ZFATQ9P243 1243 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 SLC2A6Q9UGQ3 507 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 LDB2O43679 373 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 TULP3O75386 442 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 POLR2EP19388 210 aaKnown RBP23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 CA4P22748 312 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 ARNTP27540 789 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 GBP2P32456 591 aaPredicted RBP23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 ARCN1P48444 511 aaKnown RBP23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 TEDDM1Q5T9Z0 273 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 KIAA0930Q6ICG6 404 aaPredicted RBP23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 EP400NLQ6ZTU2 488 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 NLRP9Q7RTR0 991 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 ADGRE3Q9BY15 652 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 EVLQ9UI08 416 aaPredicted RBP23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 ERVW-1Q9UQF0 538 aa23.06■■□□□ 1.28
SMARCB1-201ENST00000263121 GSRP00390 522 aa23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 SERPINB9P50453 376 aa23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 SNRPD1P62314 119 aaKnown RBP23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 CNGA3Q16281 694 aa23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 HSP90AA5PQ58FG0 334 aa23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 PACS1Q6VY07 963 aa23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 PCDH20Q8N6Y1 951 aaKnown RBP23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 BRSK1Q8TDC3 778 aa23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 VOPP1Q96AW1 172 aa23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 MRGPRX3Q96LB0 322 aa23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 TRABDQ9H4I3 376 aa23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 CNOT10Q9H9A5 744 aaKnown RBP23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 SLCO3A1Q9UIG8 710 aa23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 PSAT1Q9Y617 370 aa23.05■■□□□ 1.28
SMARCB1-201ENST00000263121 A0A1W2PPM1 405 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 PRKCGP05129 697 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 PAMP19021 973 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 VASPP50552 380 aaPredicted RBP23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 LAMB3Q13751 1172 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 SMAD1Q15797 465 aaKnown RBP23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 SMRP1Q8NCR6 262 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 LPCAT1Q8NF37 534 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 OR6K2Q8NGY2 324 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 BLOC1S5Q8TDH9 187 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 PEX13Q92968 403 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 RMDN1Q96DB5 314 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 CPNE1Q99829 537 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 KXD1Q9BQD3 176 aa23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.04■■□□□ 1.28
SMARCB1-201ENST00000263121 ANKRD66B4E2M5 251 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 TRAFD1O14545 582 aaPredicted RBP23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 HTRA2O43464 458 aaPredicted RBP23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 SOCS5O75159 536 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 KRT37O76014 449 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 KRT38O76015 456 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 SNRPAP09012 282 aaKnown RBP23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 BRAFP15056 766 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 PSMC3P17980 439 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 GRM2Q14416 872 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 DLG2Q15700 870 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 LGSNQ5TDP6 509 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 PARM1Q6UWI2 310 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 CNTN4Q8IWV2 1026 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 OR13J1Q8NGT2 312 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 FGF14Q92915 247 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 AGAP2Q99490 1192 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 SELENOSQ9BQE4 189 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 RIMKLBQ9ULI2 386 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 SPO11Q9Y5K1 396 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 KIAA1549LQ6ZVL6 1849 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 HMX2A2RU54 273 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 VAPBO95292 243 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 PGLSO95336 258 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 ASLP04424 464 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 PIRTP0C851 137 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 CNTFP26441 200 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 GP5P40197 560 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 ACVR1Q04771 509 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 BCL2L1Q07817 233 aa23.03■■□□□ 1.28
SMARCB1-201ENST00000263121 QPCTQ16769 361 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms