RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 E2F1Q01094 437 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 SPTAN1Q13813 2472 aaKnown RBP13.54□□□□□ -0.24
SGCA-201ENST00000262018 KRT81Q14533 505 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 EIF4HQ15056 248 aaKnown RBP13.54□□□□□ -0.24
SGCA-201ENST00000262018 DPYSL2Q16555 572 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 FYB2Q5VWT5 728 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 Q6ZNB5 142 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 SND1Q7KZF4 910 aaKnown RBP eCLIP13.54□□□□□ -0.24
SGCA-201ENST00000262018 RFX6Q8HWS3 928 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 PSTKQ8IV42 348 aaKnown RBP13.54□□□□□ -0.24
SGCA-201ENST00000262018 MREGQ8N565 214 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 EXD3Q8N9H8 876 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 SLC35B2Q8TB61 432 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 FAF2Q96CS3 445 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 PGAP3Q96FM1 320 aaPredicted RBP13.54□□□□□ -0.24
SGCA-201ENST00000262018 NEUROG2Q9H2A3 272 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 DPH5Q9H2P9 285 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 ABCC13Q9NSE7 274 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.54□□□□□ -0.24
SGCA-201ENST00000262018 OSER1Q9NX31 292 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 NAALADL1Q9UQQ1 740 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 NEU2Q9Y3R4 380 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 NOTCH2Q04721 2471 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 APOC4-APOC2K7ER74 178 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 CST8O60676 142 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 USP12O75317 370 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 DXOO77932 396 aaKnown RBP13.53□□□□□ -0.24
SGCA-201ENST00000262018 GAS8O95995 478 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 APOC2P02655 101 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 FAM153BP0C7A2 387 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 MYF5P13349 255 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 RARGP13631 454 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 IL4RP24394 825 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 CD38P28907 300 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 RPL21P46778 160 aaKnown RBP13.53□□□□□ -0.24
SGCA-201ENST00000262018 LSSP48449 732 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 PITX1P78337 314 aaPredicted RBP13.53□□□□□ -0.24
SGCA-201ENST00000262018 TFDP2Q14188 446 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 HLTFQ14527 1009 aaKnown RBP eCLIP13.53□□□□□ -0.24
SGCA-201ENST00000262018 PPP1R7Q15435 360 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 OASLQ15646 514 aaKnown RBP13.53□□□□□ -0.24
SGCA-201ENST00000262018 CA9Q16790 459 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 FAM153CQ494X1 144 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 TTC31Q49AM3 519 aaPredicted RBP13.53□□□□□ -0.24
SGCA-201ENST00000262018 FNDC3BQ53EP0 1204 aaKnown RBP13.53□□□□□ -0.24
SGCA-201ENST00000262018 ZC3H12AQ5D1E8 599 aaKnown RBP13.53□□□□□ -0.24
SGCA-201ENST00000262018 SYPL2Q5VXT5 272 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 BSPRYQ5W0U4 402 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 KLHDC10Q6PID8 442 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 GOLGA6L1Q8N7Z2 621 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 GANCQ8TET4 914 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 RNF157Q96PX1 679 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 ZNF670Q9BS34 389 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 CALN1Q9BXU9 219 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 MAK16Q9BXY0 300 aaKnown RBP13.53□□□□□ -0.24
SGCA-201ENST00000262018 FAM129AQ9BZQ8 928 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 TRIM31Q9BZY9 425 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 POLR1BQ9H9Y6 1135 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 MED4Q9NPJ6 270 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 THSD1Q9NS62 852 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 OLA1Q9NTK5 396 aaKnown RBP13.53□□□□□ -0.24
SGCA-201ENST00000262018 ZDHHC18Q9NUE0 388 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 GPATCH2LQ9NWQ4 482 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 GRHL1Q9NZI5 618 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 FAM153AQ9UHL3 310 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 NUDT5Q9UKK9 219 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 DNPEPQ9ULA0 475 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 FZD10Q9ULW2 581 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 SNX24Q9Y343 169 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 PLXNA2O75051 1894 aa13.53□□□□□ -0.24
SGCA-201ENST00000262018 TEP1Q99973 2627 aaKnown RBP13.52□□□□□ -0.25
SGCA-201ENST00000262018 M0QYT0 321 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 L1CAMP32004 1257 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 AIF1P55008 147 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 ZBTB16Q05516 673 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 MMRN1Q13201 1228 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 C10orf120Q5SQS8 335 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 TMEM215Q68D42 235 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 CCDC81Q6ZN84 652 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 CCDC185Q8N715 623 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 RNF139Q8WU17 664 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 CCDC114Q96M63 670 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 FAM118BQ9BPY3 351 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 EBF2Q9HAK2 575 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 ASCL3Q9NQ33 180 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 WHRNQ9P202 907 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 CLEC4EQ9ULY5 219 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 HPCAL4Q9UM19 191 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 AP4E1Q9UPM8 1137 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 NCKAP1Q9Y2A7 1128 aa13.52□□□□□ -0.25
SGCA-201ENST00000262018 WNT9AO14904 365 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 TIMM44O43615 452 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 STC2O76061 302 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 F9P00740 461 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 IVDP26440 423 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 CHKAP35790 457 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 DAB2P98082 770 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 OTUD4Q01804 1114 aaKnown RBP13.51□□□□□ -0.25
SGCA-201ENST00000262018 DEUP1Q05D60 604 aa13.51□□□□□ -0.25
SGCA-201ENST00000262018 UBAP2LQ14157 1087 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms