RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 SLC13A4Q9UKG4 626 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 FAM159BA6NKW6 160 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 SPTLC1O15269 473 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 DNAJB2P25686 324 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 TWF1Q12792 350 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 C1orf220Q5T0J3 134 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 TMEM214Q6NUQ4 689 aaKnown RBP16.31■□□□□ 0.2
SREBF1-201ENST00000261646 TRIM63Q969Q1 353 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 CLIC3O95833 236 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 MSH3P20585 1137 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 DDX39BQ13838 428 aaKnown RBP16.31■□□□□ 0.2
SREBF1-201ENST00000261646 ZNF460Q14592 562 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 MAPRE1Q15691 268 aaKnown RBP16.31■□□□□ 0.2
SREBF1-201ENST00000261646 TIGD7Q6NT04 549 aaPredicted RBP16.31■□□□□ 0.2
SREBF1-201ENST00000261646 PAOXQ6QHF9 649 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 TFAP2DQ7Z6R9 452 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 ABI1Q8IZP0 508 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 PYROXD2Q8N2H3 581 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 NIPA2Q8N8Q9 360 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 SYT11Q9BT88 431 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 HGH1Q9BTY7 390 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 TKTL2Q9H0I9 626 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 PNPLA8Q9NP80 782 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 RNF181Q9P0P0 153 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 SH3BP1Q9Y3L3 701 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 SNX8Q9Y5X2 465 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 NEMP2A6NFY4 417 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 C2CD4BA6NLJ0 364 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 ZNF37AP17032 561 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 AKAP5P24588 427 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 RAB15P59190 212 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 TMEM132BQ14DG7 1078 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 PGS1Q32NB8 556 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 ZNF829Q3KNS6 432 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 THAP5Q7Z6K1 395 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 TRIM69Q86WT6 500 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 ASIC4Q96FT7 647 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 MRIQ9BWK5 157 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 ULBP1Q9BZM6 244 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 SENP6Q9GZR1 1112 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 SYNPO2Q9UMS6 1093 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 INVSQ9Y283 1065 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 AZIN1O14977 448 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 SERPINI2O75830 405 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 KCNH1O95259 989 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 CTSHP09668 335 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 IL12AP29459 219 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 ADAM17P78536 824 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 TOP3AQ13472 1001 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 MARC1Q5VT66 337 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 ASB9Q96DX5 294 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 FBXL18Q96ME1 805 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 IGSF9Q9P2J2 1179 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 HIST1H2AGP0C0S8 130 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 HIST1H2ADP20671 130 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 UBA1P22314 1058 aaKnown RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 PRKCHP24723 683 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 ATXN1P54253 815 aaKnown RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 CCDC142Q17RM4 750 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 TNFAIP8L3Q5GJ75 292 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 PMF1Q6P1K2 205 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 RALGPS2Q86X27 583 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 PROX1Q92786 737 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 OTULINQ96BN8 352 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 HIST1H2AHQ96KK5 128 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 ASB2Q96Q27 587 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 HIST1H2AJQ99878 128 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 H2AFJQ9BTM1 129 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 HIPK3Q9H422 1215 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 OAZ3Q9UMX2 235 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 LAMA4Q16363 1823 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 CENPXA8MT69 81 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 BTN3A1O00481 513 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 EDIL3O43854 480 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 ZNF286BP0CG31 522 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 NCK1P16333 377 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 XPAP23025 273 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 PRKG2Q13237 762 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 IKBKEQ14164 716 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 PAN2Q504Q3 1202 aaKnown RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 CCNYL2Q5T2Q4 361 aa16.3■□□□□ 0.2
SREBF1-201ENST00000261646 RPRD1AQ96P16 312 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 COPG1Q9Y678 874 aaKnown RBP16.3■□□□□ 0.2
SREBF1-201ENST00000261646 TMEM233B4DJY2 109 aa16.29■□□□□ 0.2
SREBF1-201ENST00000261646 IPO13O94829 963 aaKnown RBP16.29■□□□□ 0.2
SREBF1-201ENST00000261646 MYCP01106 439 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-201ENST00000261646 FGF3P11487 239 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-201ENST00000261646 PCLAFQ15004 111 aa16.29■□□□□ 0.2
SREBF1-201ENST00000261646 DCAF4L1Q3SXM0 396 aa16.29■□□□□ 0.2
SREBF1-201ENST00000261646 TJAP1Q5JTD0 557 aa16.29■□□□□ 0.2
SREBF1-201ENST00000261646 SLC39A4Q6P5W5 647 aa16.29■□□□□ 0.2
SREBF1-201ENST00000261646 CENPSQ8N2Z9 138 aa16.29■□□□□ 0.2
SREBF1-201ENST00000261646 PPM1MQ96MI6 270 aa16.29■□□□□ 0.2
SREBF1-201ENST00000261646 QKIQ96PU8 341 aaKnown RBP eCLIP16.29■□□□□ 0.28e-8■■■■□ 20.8
SREBF1-201ENST00000261646 EHD3Q9NZN3 535 aa16.29■□□□□ 0.2
SREBF1-201ENST00000261646 CNOT6Q9ULM6 557 aaKnown RBP16.29■□□□□ 0.2
SREBF1-201ENST00000261646 ANKRD12Q6UB98 2062 aa16.29■□□□□ 0.2
SREBF1-201ENST00000261646 ZNF142P52746 1687 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-201ENST00000261646 ZNF182P17025 639 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms