RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 NPNTQ6UXI9 565 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 TBC1D3Q8IZP1 549 aaPredicted RBP16.95■□□□□ 0.3
SDCBP-201ENST00000260130 UBL4BQ8N7F7 174 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 DNASE2BQ8WZ79 361 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 FATE1Q969F0 183 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 BIRC7Q96CA5 298 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 KLHL32Q96NJ5 620 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 PARD6AQ9NPB6 346 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 VPS45Q9NRW7 570 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 SEMA4GQ9NTN9 838 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 DMGDHQ9UI17 866 aaKnown RBP16.95■□□□□ 0.3
SDCBP-201ENST00000260130 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.95■□□□□ 0.3
SDCBP-201ENST00000260130 SHOX2O60902 331 aaPredicted RBP16.95■□□□□ 0.3
SDCBP-201ENST00000260130 FSBPO95073 299 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 MAOBP27338 520 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 MMP13P45452 471 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 NR2C2P49116 596 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 NEK3P51956 506 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 ADCY2Q08462 1091 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 CSRP2Q16527 193 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 PEAR1Q5VY43 1037 aaPredicted RBP16.95■□□□□ 0.3
SDCBP-201ENST00000260130 ALS2CLQ60I27 953 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 KIAA0895LQ68EN5 471 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 C8orf74Q6P047 294 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 FBXL19Q6PCT2 694 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 BZW1Q7L1Q6 419 aaKnown RBP16.95■□□□□ 0.3
SDCBP-201ENST00000260130 TEX26Q8N6G2 289 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 MAML1Q92585 1016 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 ALG3Q92685 438 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 PACSIN2Q9UNF0 486 aaPredicted RBP16.95■□□□□ 0.3
SDCBP-201ENST00000260130 C16orf96A6NNT2 1141 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 ZNF806P0C7X5 589 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 HOXD12P35452 270 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 SCNN1BP51168 640 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 TAS2R38P59533 333 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 PDK1Q15118 436 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 PARS2Q7L3T8 475 aaKnown RBP16.94■□□□□ 0.3
SDCBP-201ENST00000260130 C10orf67Q8IYJ2 551 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 PGBD5Q8N414 524 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 LRRN4Q8WUT4 740 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 CAVIN3Q969G5 261 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 TUBGCP5Q96RT8 1024 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 LGMNQ99538 433 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 HEMGNQ9BXL5 484 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 TLR10Q9BXR5 811 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 EIF2B4Q9UI10 523 aaKnown RBP16.94■□□□□ 0.3
SDCBP-201ENST00000260130 ZNF292O60281 2723 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 ATXN2Q99700 1313 aaKnown RBP16.94■□□□□ 0.3
SDCBP-201ENST00000260130 C10orf142B7Z368 130 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 PIGNO95427 931 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 IGHV4-34P06331 123 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 ADRB3P13945 408 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 TGM2P21980 687 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 CETN2P41208 172 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 PPIDQ08752 370 aaKnown RBP16.94■□□□□ 0.3
SDCBP-201ENST00000260130 CCDC13Q8IYE1 715 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 SNX19Q92543 992 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 HES6Q96HZ4 224 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 ZNF641Q96N77 438 aaPredicted RBP16.94■□□□□ 0.3
SDCBP-201ENST00000260130 OLFM3Q96PB7 478 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 RUFY1Q96T51 708 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 MGME1Q9BQP7 344 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 SMOC1Q9H4F8 434 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 SUV39H2Q9H5I1 410 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 SAE1Q9UBE0 346 aaPredicted RBP16.94■□□□□ 0.3
SDCBP-201ENST00000260130 RSPH14Q9UHP6 348 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 EFR3BQ9Y2G0 817 aa16.94■□□□□ 0.3
SDCBP-201ENST00000260130 PPP1R12AO14974 1030 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-201ENST00000260130 PYGMP11217 842 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 CCNB1P14635 433 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 CR2P20023 1033 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 CXCR5P32302 372 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 MAPK8P45983 427 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 CCR5P51681 352 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 HCAR2Q8TDS4 363 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 P3H4Q92791 437 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 RAB7BQ96AH8 199 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 OSBPL8Q9BZF1 889 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 BRD8Q9H0E9 1235 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 MIR1-1HGQ9H1L0 117 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 ATP13A3Q9H7F0 1226 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 PREBQ9HCU5 417 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 RBM22Q9NW64 420 aaKnown RBP eCLIP16.93■□□□□ 0.3
SDCBP-201ENST00000260130 DKK3Q9UBP4 350 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 TPX2Q9ULW0 747 aaKnown RBP16.93■□□□□ 0.3
SDCBP-201ENST00000260130 NUMA1Q14980 2115 aa16.93■□□□□ 0.3
SDCBP-201ENST00000260130 DDX3YO15523 660 aaKnown RBP16.92■□□□□ 0.3
SDCBP-201ENST00000260130 GJB3O75712 270 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 GNSP15586 552 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 PTPN7P35236 360 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 MAXP61244 160 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 AP1S1P61966 158 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 AP1B1Q10567 949 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 NEK5Q6P3R8 708 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 FOXR1Q6PIV2 292 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 BBS12Q6ZW61 710 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 TTC7BQ86TV6 843 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 CAMK1DQ8IU85 385 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 IFT20Q8IY31 132 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 KIAA2013Q8IYS2 634 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms