RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ERBB2P04626 1255 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 TNNI3P19429 210 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 RYKP34925 604 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 CRHR1P34998 444 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ACTR1BP42025 376 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 KPNA2P52292 529 aaKnown RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 DCDC1P59894 354 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF45Q02386 682 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 TAP2Q03519 686 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 TEFQ10587 303 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 GRIK2Q13002 908 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 MTMR1Q13613 665 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF273Q14593 569 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 MTFR1Q15390 333 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 TEX30Q5JUR7 227 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ARMC6Q6NXE6 501 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 GALNT18Q6P9A2 607 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 SNX20Q7Z614 316 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 DHDDSQ86SQ9 333 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 TPRA1Q86W33 373 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 CATSPER3Q86XQ3 398 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 TDRPQ86YL5 185 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 TTC29Q8NA56 475 aaPredicted RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 KDM1BQ8NB78 822 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 GDPD5Q8WTR4 605 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 SSH1Q8WYL5 1049 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 FAM122AQ96E09 287 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 EDC3Q96F86 508 aaKnown RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 SLC9A7Q96T83 725 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ADPGKQ9BRR6 497 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 PARD6GQ9BYG4 376 aaPredicted RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 RACGAP1Q9H0H5 632 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 SAR1AQ9NR31 198 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ASH2LQ9UBL3 628 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 PPM1HQ9ULR3 514 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 MYH10P35580 1976 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 MYH15Q9Y2K3 1946 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 PTPRUQ92729 1446 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 MYOCOSA0A1B0GUC4 107 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 PQLC2LA1A4F0 135 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 KRT87PA6NCN2 255 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 AURKAO14965 403 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 GPR37O15354 613 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 GYG2O15488 501 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ATE1O95260 518 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 C8BP07358 591 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 SERPINF2P08697 491 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 FAM58BPP0C7Q3 252 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 GPX4P36969 197 aaPredicted RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 SCNN1AP37088 669 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 FDFT1P37268 417 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 CD79BP40259 229 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 CRKLP46109 303 aaKnown RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 LEPRP48357 1165 aaKnown RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 LIG4P49917 911 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 NDST1P52848 882 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 TNFAIP2Q03169 654 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 KCNMA1Q12791 1236 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 EFR3AQ14156 821 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 SMAD2Q15796 467 aaKnown RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ZFP69Q49AA0 526 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ATP13A4Q4VNC1 1196 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 CRTC2Q53ET0 693 aaPredicted RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 GNASQ5JWF2 1037 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ANKRD26P1Q6NSI1 321 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 CGB2Q6NT52 195 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 SSX9Q7RTT3 188 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 PLEKHH3Q7Z736 793 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ARID3BQ8IVW6 561 aaPredicted RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 PRSS58Q8IYP2 241 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 HIPK4Q8NE63 616 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 FAM172AQ8WUF8 416 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 CHAC2Q8WUX2 184 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 TCEAL3Q969E4 200 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 FUBP1Q96AE4 644 aaKnown RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 PGAP3Q96FM1 320 aaPredicted RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 PSMB7Q99436 277 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ZBTB18Q99592 522 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 C1orf50Q9BV19 199 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 SLC22A4Q9H015 551 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ISCUQ9H1K1 167 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 PLSCR3Q9NRY6 295 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ACOXLQ9NUZ1 547 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 GMPR2Q9P2T1 348 aaKnown RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 NARFQ9UHQ1 456 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF229Q9UJW7 825 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 PPIL1Q9Y3C6 166 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 CHD5Q8TDI0 1954 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 DICER1Q9UPY3 1922 aaKnown RBP7.8□□□□□ -1.16
GPNMB-201ENST00000258733 NRKQ7Z2Y5 1582 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 TMX2-CTNND1H3BSU7 103 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 ZBTB7BO15156 539 aaPredicted RBP7.79□□□□□ -1.16
GPNMB-201ENST00000258733 PPM1DO15297 605 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 RPS6KA4O75676 772 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 ZWINTO95229 277 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 HRGP04196 525 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 SRGAP2BP0DMP2 458 aa7.79□□□□□ -1.16
GPNMB-201ENST00000258733 MBL2P11226 248 aaPredicted RBP7.79□□□□□ -1.16
GPNMB-201ENST00000258733 NR2C1P13056 603 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms