RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 PHIPQ8WWQ0 1821 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 A0A0X1KG70 313 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 DYNC1LI2O43237 492 aaPredicted RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SUV39H1O43463 412 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SNX3O60493 162 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 OTCP00480 354 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ATP5F1P24539 256 aaPredicted RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SRP54P61011 504 aaKnown RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 BOP1Q14137 746 aaKnown RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ZFP69Q49AA0 526 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ARMC12Q5T9G4 340 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 METTL7BQ6UX53 244 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 RPTNQ6XPR3 784 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 GCNT7Q6ZNI0 430 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ADAMTSL2Q86TH1 951 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ARMC8Q8IUR7 673 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 FBXO16Q8IX29 292 aaPredicted RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 FAM71AQ8IYT1 594 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ZNF540Q8NDQ6 660 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 OR4A15Q8NGL6 344 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 HELQQ8TDG4 1101 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 PTCD2Q8WV60 388 aaKnown RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 CHCHD6Q9BRQ6 235 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 TRIM39Q9HCM9 518 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 PFDN2Q9UHV9 154 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ATF5Q9Y2D1 282 aaPredicted RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 TOPAZ1Q8N9V7 1692 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 PLOD3O60568 738 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 S100A1P23297 94 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ENPEPQ07075 957 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 NTRK3Q16288 839 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 C5orf22Q49AR2 442 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 RUNDC3AQ59EK9 446 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ZPBP2Q6X784 338 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SYT15Q9BQS2 421 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ASB7Q9H672 318 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ZNF446Q9NWS9 450 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SPG21Q9NZD8 308 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 DHRS7Q9Y394 339 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SAMHD1Q9Y3Z3 626 aaKnown RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SMCHD1A6NHR9 2005 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 PSMD11O00231 422 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SLC22A3O75751 556 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 UPP2O95045 317 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 IDH2P48735 452 aaKnown RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ARFIP1P53367 373 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 TAF5Q15542 800 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 GRIK4Q16099 956 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 MFSD5Q6N075 450 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 CRTC3Q6UUV7 619 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SV2AQ7L0J3 742 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 C1QTNF1Q9BXJ1 281 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 AGXT2Q9BYV1 514 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 PNPLA8Q9NP80 782 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 RAP2CQ9Y3L5 183 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 CCL15-CCL14A0A0B4J2E2 113 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ZSCAN5CA6NGD5 496 aaPredicted RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 IFNGP01579 166 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 S100A6P06703 90 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 CCDC166P0CW27 439 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 HGFP14210 728 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 CCNB1P14635 433 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SERPINA4P29622 427 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 CRHR1P34998 444 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 CD86P42081 329 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 PSEN1P49768 467 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 RHAGQ02094 409 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 CCL15Q16663 113 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 TRMT11Q7Z4G4 463 aaKnown RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 KLHL23Q8NBE8 558 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 PCSK9Q8NBP7 692 aaKnown RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 MARK4Q96L34 752 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 TEFMQ96QE5 360 aaKnown RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ARFGEF1Q9Y6D6 1849 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 CHURC1-FNTBB4DL54 471 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 YBX3P16989 372 aaKnown RBP eCLIP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 POLR2EP19388 210 aaKnown RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 CCR3P51677 355 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 MAPKAPK3Q16644 382 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 FSCN1Q16658 493 aaKnown RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 DENND5AQ6IQ26 1287 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SPATA19Q7Z5L4 167 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SLCO6A1Q86UG4 719 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 POC5Q8NA72 575 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 OR2T34Q8NGX1 318 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 OR2T3Q8NH03 318 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ATP13A3Q9H7F0 1226 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ABCC13Q9NSE7 274 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ZNF221Q9UK13 617 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 A0A0G2JLW4 131 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 CST1P01037 141 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 UMPSP11172 480 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 MTHFRP42898 656 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 PLK1P53350 603 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ACSM2AQ08AH3 577 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 TSC22D1Q15714 1073 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 SWT1Q5T5J6 900 aaKnown RBP4.83□□□□□ -1.64
RC3H1-201ENST00000258349 ACSM2BQ68CK6 577 aa4.83□□□□□ -1.64
RC3H1-201ENST00000258349 NEPROQ6NW34 567 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms