RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PIRO00625 290 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 NRP1O14786 923 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 ATE1O95260 518 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 HSPA8P11142 646 aaKnown RBP15.62■□□□□ 0.09
DDX55-201ENST00000238146 MYF6P23409 242 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 DNAJB2P25686 324 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 YWHAQP27348 245 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 SLC1A2P43004 574 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 NME5P56597 212 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 TTLL4Q14679 1199 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 INTS6LQ5JSJ4 861 aaKnown RBP15.62■□□□□ 0.09
DDX55-201ENST00000238146 LYSMD3Q7Z3D4 306 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 EPHX4Q8IUS5 362 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 HNRNPABQ99729 332 aaKnown RBP15.62■□□□□ 0.09
DDX55-201ENST00000238146 IGSF5Q9NSI5 407 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 CNMDO75829 334 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 UGT1A6P19224 532 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 VARSP26640 1264 aaKnown RBP15.62■□□□□ 0.09
DDX55-201ENST00000238146 SLC5A3P53794 718 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 ARHGAP1Q07960 439 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 LAMC2Q13753 1193 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 CSHL1Q14406 222 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 INTS11Q5TA45 600 aaKnown RBP15.62■□□□□ 0.09
DDX55-201ENST00000238146 CYHR1Q6ZMK1 362 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 CAMK1DQ8IU85 385 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 FUNDC1Q8IVP5 155 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 SIX6OS1Q8N1H7 587 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 PACRGLQ8N7B6 248 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 B3GALNT2Q8NCR0 500 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 APPL2Q8NEU8 664 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 USP33Q8TEY7 942 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 GIPC3Q8TF64 312 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 ADI1Q9BV57 179 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 SLC2A6Q9UGQ3 507 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 FBXW11Q9UKB1 542 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 ZNF711Q9Y462 761 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 SNX10Q9Y5X0 201 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 SHROOM3Q8TF72 1996 aa15.62■□□□□ 0.09
DDX55-201ENST00000238146 A0A087X1B8 175 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 A8MT66 165 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 BOLA2-SMG1P6H3BVE0 249 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 STAMBPO95630 424 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 MT-CYBP00156 380 aaPredicted RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 MT-CO1P00395 513 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 NPR3P17342 541 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 PLK1P53350 603 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 AIF1P55008 147 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 TECRLQ5HYJ1 363 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 ALKAL1Q6UXT8 129 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 PAQR9Q6ZVX9 377 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 OSTM1Q86WC4 334 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 AFAP1L2Q8N4X5 818 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 SHCBP1Q8NEM2 672 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 TNIP2Q8NFZ5 429 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 TNIP3Q96KP6 325 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 NPLQ9BXD5 320 aaPredicted RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 CXorf21Q9HAI6 301 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 EML4Q9HC35 981 aaKnown RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 GDAP2Q9NXN4 497 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 AURKCQ9UQB9 309 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 WDR90Q96KV7 1748 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 DNAJC25-GNG10A0A024R161 153 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 FAM149AA5PLN7 773 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 AURKAO14965 403 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 IPO13O94829 963 aaKnown RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 SEC24DO94855 1032 aaPredicted RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 TFPTP0C1Z6 253 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 ZNF286BP0CG31 522 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 CD97P48960 835 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 TKTL1P51854 596 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 RABGGTBP53611 331 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 NAA20P61599 178 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 PFKPQ01813 784 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 MERTKQ12866 999 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 TBCELQ5QJ74 424 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 BTBD8Q5XKL5 378 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 RETREG3Q86VR2 466 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 RNF135Q8IUD6 432 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 APOBEC3FQ8IUX4 373 aaKnown RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 LRCH3Q96II8 777 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 CELF6Q96J87 481 aaKnown RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 MUC3BQ9H195 1237 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 FBRSL1Q9HCM7 1045 aaKnown RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 GINS2Q9Y248 185 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 TSC2P49815 1807 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 ATP6AP2A0A1C7CYW4 349 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 ATP6AP2O75787 350 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 RECQL4O94761 1208 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 CD151P48509 253 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 KPNA2P52292 529 aaKnown RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 CBX3Q13185 183 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 MAP7D1Q3KQU3 841 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 DENND5AQ6IQ26 1287 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 SLC27A1Q6PCB7 646 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 CLEC20AQ6ZU45 233 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 LARP4Q71RC2 724 aaKnown RBP eCLIP15.61■□□□□ 0.09
DDX55-201ENST00000238146 ERO1BQ86YB8 467 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 KLHDC8BQ8IXV7 354 aa15.61■□□□□ 0.09
DDX55-201ENST00000238146 ZBTB8BQ8NAP8 495 aaPredicted RBP15.61■□□□□ 0.09
DDX55-201ENST00000238146 KCTD13Q8WZ19 329 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms