RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PRMT2P55345 433 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 LSM12Q3MHD2 195 aaKnown RBP22.38■■□□□ 1.17
CCDC9-201ENST00000221922 ATAD1Q8NBU5 361 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 HIPK4Q8NE63 616 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 RP9Q8TA86 221 aaKnown RBP22.38■■□□□ 1.17
CCDC9-201ENST00000221922 GABPB2Q8TAK5 448 aaPredicted RBP22.38■■□□□ 1.17
CCDC9-201ENST00000221922 STYXQ8WUJ0 223 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 BTBD9Q96Q07 612 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 ZYG11BQ9C0D3 744 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 WDR55Q9H6Y2 383 aaPredicted RBP22.38■■□□□ 1.17
CCDC9-201ENST00000221922 TREX1Q9NSU2 369 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 CLIC5Q9NZA1 410 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 VPS28Q9UK41 221 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 TK2O00142 265 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 PITPNM1O00562 1244 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 GRID2O43424 1007 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 RTN3O95197 1032 aaPredicted RBP22.38■■□□□ 1.17
CCDC9-201ENST00000221922 SLC35E2BP0CK96 405 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 GABRB3P28472 473 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 SERPINB5P36952 375 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 PRKAA1Q13131 559 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 TRIP10Q15642 601 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 ARL13AQ5H913 290 aaPredicted RBP22.38■■□□□ 1.17
CCDC9-201ENST00000221922 OGFRL1Q5TC84 451 aaPredicted RBP22.38■■□□□ 1.17
CCDC9-201ENST00000221922 C16orf89Q6UX73 402 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 ATP6V0D2Q8N8Y2 350 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 AGR3Q8TD06 166 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 SEPT8Q92599 483 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 SERPINI1Q99574 410 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 PRDM5Q9NQX1 630 aaPredicted RBP22.38■■□□□ 1.17
CCDC9-201ENST00000221922 TMEM248Q9NWD8 314 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 VTI1BQ9UEU0 232 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 ACOT9Q9Y305 439 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 GOLGA8QA0A0J9YX86 632 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 GOLGA8OA6NCC3 632 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 TARM1B6A8C7 271 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 GOLGA8NF8WBI6 632 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 SLCO1B7G3V0H7 640 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 PHGDHO43175 533 aaKnown RBP22.37■■□□□ 1.17
CCDC9-201ENST00000221922 ALDH2P05091 517 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 CD1EP15812 388 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 TFEBP19484 476 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 SAT1P21673 171 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 YWHAQP27348 245 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 RAB10P61026 200 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 ARHGEF6Q15052 776 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 SNX32Q86XE0 403 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 SLC41A1Q8IVJ1 513 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 ZNF683Q8IZ20 524 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 TTC9BQ8N6N2 239 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 KYQ8NBH2 561 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 SCYL1Q96KG9 808 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 NOL6Q9H6R4 1146 aaKnown RBP22.37■■□□□ 1.17
CCDC9-201ENST00000221922 ARNT2Q9HBZ2 717 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 VPS45Q9NRW7 570 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 OLA1Q9NTK5 396 aaKnown RBP22.37■■□□□ 1.17
CCDC9-201ENST00000221922 C6orf203Q9P0P8 240 aaPredicted RBP22.37■■□□□ 1.17
CCDC9-201ENST00000221922 RUVBL2Q9Y230 463 aaKnown RBP22.37■■□□□ 1.17
CCDC9-201ENST00000221922 FAM95CA0A1B0GW59 222 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 HOXA2O43364 376 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 PIGNO95427 931 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 STMN1P16949 149 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 ARNTP27540 789 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 SLC11A1P49279 550 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 NUDT2P50583 147 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 WNT3AP56704 352 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 SATB1Q01826 763 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 SMARCB1Q12824 385 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 ELAVL2Q12926 359 aaKnown RBP22.37■■□□□ 1.17
CCDC9-201ENST00000221922 KDELC1Q6UW63 502 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 KIAA0408Q6ZU52 694 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 SDCCAG8Q86SQ7 713 aaPredicted RBP22.37■■□□□ 1.17
CCDC9-201ENST00000221922 SETD3Q86TU7 594 aaPredicted RBP22.37■■□□□ 1.17
CCDC9-201ENST00000221922 DENND6AQ8IWF6 608 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 ST13P4Q8IZP2 240 aaPredicted RBP22.37■■□□□ 1.17
CCDC9-201ENST00000221922 C2CD4AQ8NCU7 369 aaPredicted RBP22.37■■□□□ 1.17
CCDC9-201ENST00000221922 SPPL2BQ8TCT7 592 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 PSMD13Q9UNM6 376 aa22.37■■□□□ 1.17
CCDC9-201ENST00000221922 HEATR9A2RTY3 570 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 AIM2O14862 343 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 CD151P48509 253 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 GATMP50440 423 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 KPNA2P52292 529 aaKnown RBP22.36■■□□□ 1.17
CCDC9-201ENST00000221922 MPP1Q00013 466 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 DLG1Q12959 904 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 GPR17Q13304 367 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 CTBP1Q13363 440 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 CNGA3Q16281 694 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 LIN52Q52LA3 116 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 MS4A13Q5J8X5 152 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 ACBD5Q5T8D3 534 aaPredicted RBP22.36■■□□□ 1.17
CCDC9-201ENST00000221922 FUT10Q6P4F1 479 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 DSELQ8IZU8 1212 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 FBXO32Q969P5 355 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 MOCOSQ96EN8 888 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 IMP4Q96G21 291 aaKnown RBP22.36■■□□□ 1.17
CCDC9-201ENST00000221922 SPATA17Q96L03 361 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 RANBP9Q96S59 729 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 COMMD8Q9NX08 183 aa22.36■■□□□ 1.17
CCDC9-201ENST00000221922 LRFN2Q9ULH4 789 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms