RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Clptm1lQ8BXA5 539 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tfb1mQ8JZM0 345 aaKnown RBP13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Snapc1Q8K0S9 389 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Pofut2Q8VHI3 429 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Katnal2Q9D3R6 539 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Q9D979 236 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Pik3cgQ9JHG7 1102 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 A0A1Y7VP24 259 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 L3mbtl1A2A5N8 826 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ttc23lA6H6E9 458 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 RerglB2RVE2 204 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Zbtb11G5E8B9 1050 aaKnown RBP13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Dcpp3L7N259 170 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Kcnn4O89109 425 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Agtr2P35374 363 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 PfkmP47857 780 aaKnown RBP13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 EdnrbP48302 442 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Psg28Q4KL66 472 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Proser1Q5PRE5 913 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tmem270Q6UJB9 264 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Smndc1Q8BGT7 238 aaKnown RBP13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Thoc5Q8BKT7 683 aaKnown RBP13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Nat14Q8BVG8 206 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 OsgepQ8BWU5 335 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Lrrc66Q8K0B3 872 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 MiosQ8VE19 875 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Zfp617Q91WM0 559 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Dmap1Q9JI44 468 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Dcun1d1Q9QZ73 259 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 MrasO08989 208 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Apoa4P06728 395 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Rps24P62849 133 aaKnown RBP13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Smad3Q8BUN5 425 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Sgpl1Q8R0X7 568 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Ddx1Q91VR5 740 aaKnown RBP13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Duoxa2Q9D311 320 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Tchhl1Q9D3P1 638 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Actrt2Q9D9L5 377 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Pias4Q9JM05 507 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Cdkl2Q9QUK0 568 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Tagln3Q9R1Q8 199 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Krt6bQ9Z331 562 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Sf3b1Q99NB9 1304 aaKnown RBP13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Rgs4O08899 205 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Sh3pxd2aO89032 1124 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Asgr1P34927 284 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Vps45P97390 570 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Pcgf5Q3UK78 256 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Olfr533Q7TRT7 320 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Metap1Q8BP48 386 aaKnown RBP13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Rnf208Q8K0W3 265 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Ablim1Q8K4G5 861 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Olfr449Q8VGW8 311 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Mark1Q8VHJ5 795 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 DeraQ91YP3 318 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 GsdmcQ99NB5 468 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Olfr706Q9EPF8 316 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Stau1Q9Z108 487 aaKnown RBP13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Slc23a1Q9Z2J0 605 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Vmn2r44L7N2E1 861 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Atxn1lP0C7T6 687 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 RxraP28700 467 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Gabrr2P56476 465 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Polr1bP70700 1135 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 1700061G19RikQ08EE8 705 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Atg16l2Q6KAU8 623 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Bnip1Q6QD59 228 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Zfp719Q8BIV1 735 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Cpsf7Q8BTV2 471 aaKnown RBP13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Anapc2Q8BZQ7 837 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Bhlhe22Q8C6A8 355 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Haus8Q99L00 373 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Ssu72Q9CY97 194 aaKnown RBP13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Olfr703Q9EPF5 319 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Epm2aQ9WUA5 330 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Ap4s1Q9WVL1 144 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Znf536Q8K083 1302 aa13.33□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Gm13276A0A087WR18 182 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Nipsnap3aB1AWZ3 247 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Cd4P06332 457 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 St3gal1P54751 337 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Meaf6Q2VPQ9 191 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Ppm1hQ3UYC0 513 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Nup54Q8BTS4 510 aaKnown RBP13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Trim14Q8BVW3 440 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Nrbf2Q8VCQ3 287 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Olfr345Q8VGK4 311 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Rsph1Q8VIG3 301 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Rnf145Q5SWK7 663 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 PtprrQ62132 656 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Arhgap30Q640N3 1101 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 RgnQ64374 299 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Arhgap20Q6IFT4 1182 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Cd300aQ6SJQ0 318 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Rap2cQ8BU31 183 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Usp43Q8BUM9 1132 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Fbxo33Q8VE08 562 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Mlc1Q8VHK5 382 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Dnajb4Q9D832 337 aa13.32□□□□□ -0.28
Pdgfra-205ENSMUST00000201711 Col2a1P28481 1487 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms