RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Adgra3Q7TT36 1310 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 FAM186AQ9D9R9 1790 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Prss47A0A0N4SVQ0 395 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Cyp26c1B2RXA7 518 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Pgbd5D3YZI9 523 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Vmn2r72D3Z4N8 856 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Dusp8O09112 663 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Rb1P13405 921 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Scg3P47867 471 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tuba4aP68368 448 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 RalgdsQ03385 852 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Ccdc162pQ0VG85 912 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Esyt2Q3TZZ7 845 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 P3h1Q3V1T4 739 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Krt33bQ61897 404 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Senp5Q6NXL6 749 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Q6PD19 689 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tmem39bQ810L4 492 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gga3Q8BMI3 718 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 CptpQ8BS40 216 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Slco2b1Q8BXB6 683 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Emc1Q8C7X2 997 aaKnown RBP7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Trmt6Q8CE96 497 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 SrrdQ8K2M3 249 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Mta1Q8K4B0 715 aaKnown RBP7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gsg1Q8R1W2 324 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Nkd2Q8VE28 461 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Sorcs3Q8VI51 1219 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Prss42Q8VIF2 335 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Scgb1b27Q91WB5 92 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Taf5lQ91WQ5 589 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Pramef12Q9D2F1 463 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Cbx6Q9DBY5 414 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Cwc15Q9JHS9 229 aaKnown RBP7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tmod2Q9JKK7 351 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 CtsmQ9JL96 333 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Psma4Q9R1P0 261 aa7.34□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Myh14Q6URW6 2000 aa7.34□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Pitpnm2Q6ZPQ6 1335 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Calcoco2A2A6M5 331 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Clrn2B2RVW2 232 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 CrnnD3YUU6 520 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 4930444G20RikD3Z741 495 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Zfp712E9PXJ4 705 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 BC024978J3QPC3 361 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Alox12P39655 663 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Tacr3P47937 452 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Plscr4P58196 326 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Hdac2P70288 488 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Gm11437Q5QR91 290 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Klf4Q60793 483 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Dpp10Q6NXK7 797 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Tmem30bQ8BHG3 353 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Pgm5Q8BZF8 567 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Tmem82Q8R115 356 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Pla2g12bQ99P27 195 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Nsmce3Q9CPR8 279 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 PdclQ9DBX2 301 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Pdzd4Q9QY39 772 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Wnt16Q9QYS1 364 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Slc26a4Q9R155 780 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Ltbp2O08999 1813 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Pnpla6Q3TRM4 1355 aa7.33□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Iqcj-Schip1A0A088MLT8 559 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Pet2A2AHY8 747 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Flvcr1B2RXV4 560 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Elmsan1E9Q2I4 1089 aaKnown RBP7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Hoxa7P02830 229 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Schip1P0DPB4 484 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Nkx2-5P42582 318 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Eif5P59325 429 aaKnown RBP7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Taf1aP97357 453 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Agbl4Q09LZ8 540 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Tmem52bQ0VBF2 186 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Hif3aQ0VBL6 662 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Trim80Q3V061 624 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Sh2d1b2Q45HK4 132 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Cyp24a1Q64441 514 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 N4bp1Q6A037 893 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Krt74Q6IFZ9 495 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Naif1Q6PFD7 327 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Trpv1Q704Y3 839 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Letm2Q7TNU7 480 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Pcid2Q8BFV2 399 aaKnown RBP7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Aldh8a1Q8BH00 487 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Ankrd9Q8BH83 326 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Olfm5Q8BU90 496 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 C1raQ8CG16 707 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Lrrc66Q8K0B3 872 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Tbc1d23Q8K0F1 684 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Ubac1Q8VDI7 409 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Rnh1Q91VI7 456 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Ankrd54Q91WK7 299 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Ubxn6Q99PL6 442 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Zbed3Q9D0L1 228 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Rexo2Q9D8S4 237 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Cxcl11Q9JHH5 100 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Htr6Q9R1C8 440 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Krt27Q9Z320 448 aa7.32□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Krt24A1L317 512 aa7.31□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms