RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 SpastQ9QYY8 614 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Lcn5A2AJB7 192 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Spp1P10923 294 aaKnown RBP23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Rin3P59729 980 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Opa3Q505D7 179 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Brsk2Q69Z98 735 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Hnrnpa0Q9CX86 305 aaKnown RBP23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Iigp1Q9QZ85 413 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Kcnh1Q60603 989 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Nlrp10Q8CCN1 673 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Fmo2Q8K2I3 535 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Actl7bQ9QY83 418 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Vmn2r27D3YUK6 857 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Rbl1Q64701 1063 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Aste1Q8BIR2 672 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Fam131aQ8BWU3 361 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Cntnap4Q99P47 1310 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ndufb5Q9CQH3 189 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tomm20lQ9D4V6 152 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Hmgn3Q9DCB1 99 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Adgra3Q7TT36 1310 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Cyp2d34L7N463 504 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 PtgisO35074 501 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Rgs14P97492 547 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 D3Ertd751eQ8BGN2 192 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 R3hcc1lQ8BJM3 775 aaKnown RBP23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Dnm1lQ8K1M6 742 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 CarfQ8VHI4 689 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Trim39Q9ESN2 488 aa23.28■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Fbxl18E9PYR1 771 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Vmn2r35E9Q7U8 861 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Barx2O08686 283 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Anxa6P14824 673 aaKnown RBP23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Fdft1P53798 416 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pydc3Q3V3Q4 588 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Scube3Q66PY1 993 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Epha10Q8BYG9 1007 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Mark1Q8VHJ5 795 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Mgrn1Q9D074 532 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 TfebQ9R210 475 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Parp14Q2EMV9 1817 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 PvalbP32848 110 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Gata5P97489 404 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Klra2Q60660 288 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pfkfb4Q6DTY7 469 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 FsbpQ8BKE5 299 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 HlcsQ920N2 722 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Lactbl1S4R213 581 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Gm3033M0QWI0 180 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Gm3532M0QWL4 194 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Banf1O54962 89 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Hsd17b2P51658 381 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 RogdiQ3TDK6 287 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Klhl42Q8BFQ9 493 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ildr1Q8CBR1 537 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Zfp985A2A7A5 519 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Gm3636E9Q5P1 227 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ptp4a2O70274 167 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 MycP01108 439 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Alas2P08680 587 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Trpv1Q704Y3 839 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tas2r125Q7M710 311 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Kdm1bQ8CIG3 826 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 B3gnt7Q8K0J2 397 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 DeraQ91YP3 318 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pacsin3Q99JB8 424 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 PorcnQ9JJJ7 461 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ercc6l2Q9JIM3 1537 aa23.27■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Arhgap36B1AUC7 590 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 AgxtO35423 414 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cdh4P39038 913 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Hmgcs2P54869 508 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Nkx2-3P97334 362 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Ggnbp1Q6K1E7 370 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Zdhhc15Q8BGJ0 337 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Ugt3a2Q8JZZ0 523 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Il22Q9JJY9 179 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Krt28A6BLY7 462 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cyp2c38P56655 490 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Gal3st3P61315 431 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 VcpkmtQ8C436 228 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Carm1Q9WVG6 608 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Mybpc1D3YU50 1127 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 DtymkP97930 212 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Ccdc61Q3UJV1 511 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Trim40Q3UWA4 246 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cdc14aQ6GQT0 603 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Msantd2Q6NZR2 559 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 TiprlQ8BH58 271 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Q8BL95 290 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Tnfaip8l1Q8K288 186 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Tfap2dQ91ZK0 452 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Trps1Q925H1 1281 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Phf10Q9D8M7 497 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Olfr704Q9EPF6 315 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Pdcd11Q6NS46 1862 aaKnown RBP23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Gm6811E9Q3Y8 510 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Aldh1a2Q62148 518 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Tgm6Q8BM11 706 aa23.26■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Clptm1lQ8BXA5 539 aa23.26■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 63.7 ms