RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Znf280cQ6P3Y5 742 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Slc39a14Q75N73 489 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tmem145Q8C4U2 746 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pcdhgb1Q91XX8 918 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Mat2bQ99LB6 334 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Mrps5Q99N87 432 aaKnown RBP11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Serpinb11Q9CQV3 388 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Rprd1bQ9CSU0 326 aaKnown RBP11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 B4galt5Q9JMK0 388 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pdzd4Q9QY39 772 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 CtsfQ9R013 462 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Slc22a3Q9WTW5 551 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Arih1Q9Z1K5 555 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Spata31d1aE9QA35 1336 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm29133A0A1B0GT72 266 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm21731A0A286YDE9 180 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Krt28A6BLY7 462 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tmem233D3Z1U7 110 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Vmn2r67K7N6T2 851 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tuba3aP05214 450 aaKnown RBP11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 C2P21180 760 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Cdc25cP48967 447 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pou6f1Q07916 301 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Cd180Q62192 661 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ddr2Q62371 854 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Prrg3Q6PAQ9 231 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Bhlhb9Q6PB60 539 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Kmt5cQ6Q783 468 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 SyncripQ7TMK9 623 aaKnown RBP11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Olfr26Q7TRB7 308 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Rfx6Q8C7R7 927 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Vmn1r64Q8R2B8 320 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tas1r3Q925D8 858 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Kif19Q99PT9 997 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ampd2Q9DBT5 798 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 MecrQ9DCS3 373 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 CtsmQ9JL96 333 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Copg2Q9QXK3 871 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Map3k14Q9WUL6 942 aa11.61□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm3424L7N298 263 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm8246M0QWX9 263 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gjb1P28230 283 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Zrsr1Q64707 428 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Plppr4Q7TME0 766 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Bpifb3Q80ZU7 473 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Sorcs3Q8VI51 1219 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Cdyl2Q9D5D8 503 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Dnajb4Q9D832 337 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tor3aQ9ER38 385 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Slco1c1Q9ERB5 715 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Cyb561d2Q9WUE3 222 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Vmn2r25W4VSP2 855 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Myo5aQ99104 1853 aaKnown RBP11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 AspgA0JNU3 564 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm10338K7N692 204 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm3187M0QWW3 260 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 ClockO08785 855 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Zfy2P20662 777 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Foxp2P58463 714 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 SnrpfP62307 86 aaKnown RBP11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 InhbbQ04999 411 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 MocosQ14CH1 862 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ndst1Q3UHN9 882 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Abcb7Q61102 752 aaKnown RBP11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Fndc3bQ6NWW9 1207 aaKnown RBP11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tmem130Q6NXM3 419 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Znf507Q6ZPY5 941 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Amigo2Q80ZD9 519 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 IfneQ80ZF2 192 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tdp1Q8BJ37 609 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ppp4r4Q8C0Y0 875 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Rpp40Q8R1F9 363 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Elf5Q8VDK3 253 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Depdc7Q91WS7 511 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 KlbQ99N32 1043 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Snx2Q9CWK8 519 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pdk2Q9JK42 407 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Rai2Q9QVY8 529 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Trpc3Q9QZC1 836 aa11.6□□□□□ -0.55
Sdc1-201ENSMUST00000020911 EloblA6PWE0 161 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Sult2b1O35400 338 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Bnc1O35914 961 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Arl6O88848 186 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Rrm2P11157 390 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Serpinh1P19324 417 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Grik2P39087 908 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tuba1cP68373 449 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 PrkcbP68404 671 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 OxtrP97926 388 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Grin2cQ01098 1239 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Krt80Q0VBK2 452 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 4930480E11RikQ0VG34 394 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm4952Q5FW57 296 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Myl6Q60605 151 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Sox17Q61473 419 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Kctd12Q6WVG3 327 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Plekha8Q80W71 519 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tmem198Q8BG75 360 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Slc7a14Q8BXR1 771 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tmem252Q8C353 183 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms