RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Six3Q62233 333 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Clptm1lQ8BXA5 539 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 GrpQ8R1I2 146 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Mtfr1Q99MB2 328 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Wdr89Q9D0R9 386 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gsdmdc1Q9D8T2 487 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Cd320Q9Z1P5 260 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Btbd19S4R1I0 287 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Olfr1049A2ARZ0 308 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gm10717D3Z1I8 228 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Zfp850J3QPC5 689 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Olfr603L7N1Y4 312 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ebf1Q07802 591 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Nr1h2Q60644 446 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Fam120bQ6RI63 786 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Slc18a2Q8BRU6 517 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Rap2cQ8BU31 183 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 IrgcQ8C262 412 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Treml1Q8K558 317 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Slc22a19Q8VCA0 551 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 AmotQ8VHG2 1126 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Crtc3Q91X84 619 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gprc5bQ923Z0 410 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 Rsl24d1Q99L28 163 aa16.33■□□□□ 0.21
Trim28-201ENSMUST00000005705 9230113P08RikD3YWX3 137 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Zfp558E9Q1J0 407 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 C6E9Q6D8 931 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 1600015I10RikE9Q745 711 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm7942L7N277 499 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pbx3O35317 434 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 ZfaP23607 742 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Atp5bP56480 529 aaKnown RBP16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pla2g5P97391 137 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Mc1rQ01727 315 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Smyd5Q3TYX3 416 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Znf865Q3U3I9 1058 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 BtrcQ3ULA2 605 aaKnown RBP16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Thrap3Q569Z6 951 aaKnown RBP16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Znf451Q8C0P7 1056 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Slc47a1Q8K0H1 567 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gsg1Q8R1W2 324 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Slc5a9Q8VDT1 685 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Hnrnpa0Q9CX86 305 aaKnown RBP16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Neurl2Q9D0S4 285 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Slc2a5Q9WV38 501 aa16.33■□□□□ 0.2
Trim28-201ENSMUST00000005705 Mkrn2osD3Z393 217 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ybx1P62960 322 aaKnown RBP16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Abcd2Q61285 741 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Six4Q61321 775 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Itih1Q61702 907 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Dlx3Q64205 287 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Polr2eQ80UW8 210 aaKnown RBP16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gtf3c4Q8BMQ2 817 aaKnown RBP16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Metap1Q8BP48 386 aaKnown RBP16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rab36Q8CAM5 267 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Il36gQ8R460 164 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pcdhb6Q91XZ4 772 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Zfp985A2A7A5 519 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 DgkdE9PUQ8 1220 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Olfr292F8VQ84 308 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Psmb10O35955 273 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Hoxb8P09632 243 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Has1Q61647 583 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ggnbp1Q6K1E7 370 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Cfap206Q6PE87 622 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Naaladl1Q7M758 745 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Reps2Q80XA6 521 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Slc44a2Q8BY89 706 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 CtbsQ8R242 366 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ppp1r8Q8R3G1 351 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pth2rQ91V95 546 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 GcshQ91WK5 170 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Dus2Q9D7B1 493 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Spock2Q9ER58 423 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Cyb561d2Q9WUE3 222 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ap4b1Q9WV76 738 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm10406A6NAS4 205 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm3373A6NAS7 205 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Prrt4B2RU40 902 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Acp4D3YTS9 425 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm3252E9PUT9 216 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm3002E9PW72 216 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm3298E9PW80 205 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm3468E9QAJ8 216 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm5145F8VQ88 278 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm3667K7N757 205 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Hes2O54792 157 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Sbk3P0C5K0 361 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 InipQ3TXT3 104 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Plcl1Q3USB7 1096 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ppm1hQ3UYC0 513 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm3558Q5FWC9 205 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Mief2Q5NCS9 454 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 RadilQ69Z89 1099 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm5414Q6IFZ8 552 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Alkbh8Q80Y20 664 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 UnkQ8BL48 810 aaKnown RBP16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Arhgap28Q8BN58 729 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Strip2Q8C9H6 844 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Prpf19Q99KP6 504 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms