RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 NME5P56597 212 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 YBX1P67809 324 aaKnown RBP20.69■□□□□ 0.9
PMS1-222ENST00000639501 GALNT2Q10471 571 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 MERTKQ12866 999 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 STX5Q13190 355 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 AMHR2Q16671 573 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 OTUD1Q5VV17 481 aaPredicted RBP20.69■□□□□ 0.9
PMS1-222ENST00000639501 ZNF280DQ6N043 979 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 MFSD2AQ8NA29 543 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 OR2T34Q8NGX1 318 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 OR2T3Q8NH03 318 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 TSNARE1Q96NA8 513 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 GPATCH1Q9BRR8 931 aaKnown RBP20.69■□□□□ 0.9
PMS1-222ENST00000639501 EFHD1Q9BUP0 239 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 SOX17Q9H6I2 414 aaPredicted RBP20.69■□□□□ 0.9
PMS1-222ENST00000639501 DPP3Q9NY33 737 aa20.69■□□□□ 0.9
PMS1-222ENST00000639501 ZBTB24O43167 697 aaPredicted RBP20.68■□□□□ 0.9
PMS1-222ENST00000639501 ZNF182P17025 639 aaPredicted RBP20.68■□□□□ 0.9
PMS1-222ENST00000639501 LRPAP1P30533 357 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 OAZ1P54368 228 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 MPP1Q00013 466 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 KCTD11Q693B1 232 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 C8orf82Q6P1X6 216 aaPredicted RBP20.68■□□□□ 0.9
PMS1-222ENST00000639501 C16orf87Q6PH81 154 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.68■□□□□ 0.9
PMS1-222ENST00000639501 TNIP2Q8NFZ5 429 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 ERLEC1Q96DZ1 483 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 FTHL17Q9BXU8 183 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 POMKQ9H5K3 350 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 PTBP2Q9UKA9 531 aaKnown RBP20.68■□□□□ 0.9
PMS1-222ENST00000639501 TRPC5OSA6NMA1 111 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 AHSGP02765 367 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 ZNF12P17014 697 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 ADORA2BP29275 332 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 PRKAA2P54646 552 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 SLC12A1Q13621 1099 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 SLC36A3Q495N2 470 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 DENND6AQ8IWF6 608 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 GPC2Q8N158 579 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 CYGBQ8WWM9 190 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 SEPT1Q8WYJ6 367 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 RHOJQ9H4E5 214 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 MRPL40Q9NQ50 206 aaKnown RBP20.68■□□□□ 0.9
PMS1-222ENST00000639501 ARMC1Q9NVT9 282 aa20.68■□□□□ 0.9
PMS1-222ENST00000639501 SRP72O76094 671 aaKnown RBP20.67■□□□□ 0.9
PMS1-222ENST00000639501 SQLEQ14534 574 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 NEDD8Q15843 81 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 SLC15A4Q8N697 577 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 AFG1LQ8WV93 481 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 CYP4F12Q9HCS2 524 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 CROTQ9UKG9 612 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 SHROOM3Q8TF72 1996 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 UBDO15205 165 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 KCNA5P22460 613 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 YWHAQP27348 245 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 OXTRP30559 389 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 SULT1E1P49888 294 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 MTA1Q13330 715 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 SPIDRQ14159 915 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 SAMD4BQ5PRF9 694 aaKnown RBP20.67■□□□□ 0.9
PMS1-222ENST00000639501 TBCELQ5QJ74 424 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 KCTD8Q6ZWB6 473 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 ZC3H7AQ8IWR0 971 aaKnown RBP20.67■□□□□ 0.9
PMS1-222ENST00000639501 ACDQ96AP0 544 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 EGFL7Q9UHF1 273 aa20.67■□□□□ 0.9
PMS1-222ENST00000639501 FAM72CH0Y354 149 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 ARIH2O95376 493 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 SNRPB2P08579 225 aaKnown RBP20.66■□□□□ 0.9
PMS1-222ENST00000639501 CYP2B6P20813 491 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 HOXD12P35452 270 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 GJA9P57773 515 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 GNA12Q03113 381 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 ZBTB17Q13105 803 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 FRG1Q14331 258 aaKnown RBP20.66■□□□□ 0.9
PMS1-222ENST00000639501 GPR162Q16538 588 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 FAM72AQ5TYM5 149 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 FAM72DQ6L9T8 149 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 RETREG3Q86VR2 466 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 FAM72BQ86X60 149 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 SLC15A3Q8IY34 581 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 ZNF420Q8TAQ5 688 aaPredicted RBP20.66■□□□□ 0.9
PMS1-222ENST00000639501 CHPT1Q8WUD6 406 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 IL1RL2Q9HB29 575 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 FBRSL1Q9HCM7 1045 aaKnown RBP20.66■□□□□ 0.9
PMS1-222ENST00000639501 SETD4Q9NVD3 440 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 OAZ3Q9UMX2 235 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 TRIM64BA6NI03 449 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 POLR2IP36954 125 aaKnown RBP20.66■□□□□ 0.9
PMS1-222ENST00000639501 MLLT10P55197 1068 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 RBP5P82980 135 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 CTBP1Q13363 440 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 INTS11Q5TA45 600 aaKnown RBP20.66■□□□□ 0.9
PMS1-222ENST00000639501 C9orf131Q5VYM1 1079 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 ZDHHC17Q8IUH5 632 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 SPPL2CQ8IUH8 684 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 DEFB106AQ8N104 65 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 DCPSQ96C86 337 aaKnown RBP20.66■□□□□ 0.9
PMS1-222ENST00000639501 ASB7Q9H672 318 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 AGPAT4Q9NRZ5 378 aa20.66■□□□□ 0.9
PMS1-222ENST00000639501 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms