RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 LRIG1Q96JA1 1093 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 FEM1CQ96JP0 617 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 WRAP53Q9BUR4 548 aaKnown RBP17.94■□□□□ 0.46
PNKP-230ENST00000638016 OSBPL1AQ9BXW6 950 aa17.94■□□□□ 0.46
PNKP-230ENST00000638016 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.94■□□□□ 0.46
PNKP-230ENST00000638016 BZW2Q9Y6E2 419 aaKnown RBP17.94■□□□□ 0.46
PNKP-230ENST00000638016 KNTC1P50748 2209 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 FAM221BA6H8Z2 402 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 ARHGAP42A6NI28 874 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 TRIM38O00635 465 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 ENC1O14682 589 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 LDOC1O95751 146 aaPredicted RBP17.93■□□□□ 0.46
PNKP-230ENST00000638016 CYP1A2P05177 515 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 PTMSP20962 102 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 PCK1P35558 622 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 EIF4A3P38919 411 aaKnown RBP17.93■□□□□ 0.46
PNKP-230ENST00000638016 SLC25A11Q02978 314 aaKnown RBP17.93■□□□□ 0.46
PNKP-230ENST00000638016 DPYSL2Q16555 572 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 INAVAQ3KP66 663 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 CAMK1DQ8IU85 385 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 SLC25A45Q8N413 288 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 OXR1Q8N573 874 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 ZCCHC14Q8WYQ9 949 aaKnown RBP17.93■□□□□ 0.46
PNKP-230ENST00000638016 NCAPGQ9BPX3 1015 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 C1QTNF2Q9BXJ5 285 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 SP110Q9HB58 689 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 GPR27Q9NS67 375 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 COQ6Q9Y2Z9 468 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 CFAP47Q6ZTR5 3102 aa17.93■□□□□ 0.46
PNKP-230ENST00000638016 ZFHX4Q86UP3 3567 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 CELSR3Q9NYQ7 3312 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 A6NNZ2 444 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 EIF3CLB5ME19 914 aaKnown RBP17.92■□□□□ 0.46
PNKP-230ENST00000638016 YKT6O15498 198 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 FFAR2O15552 330 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 TSPAN6O43657 245 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 MAGEC1O60732 1142 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 CD48P09326 243 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 MYF5P13349 255 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 IGFALSP35858 605 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 GJC1P36383 396 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 MMRN1Q13201 1228 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 FZD2Q14332 565 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 KYAT3Q6YP21 454 aaKnown RBP17.92■□□□□ 0.46
PNKP-230ENST00000638016 CCNI2Q6ZMN8 369 aaPredicted RBP17.92■□□□□ 0.46
PNKP-230ENST00000638016 POLNQ7Z5Q5 900 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 VPS36Q86VN1 386 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 KDF1Q8NAX2 398 aaPredicted RBP17.92■□□□□ 0.46
PNKP-230ENST00000638016 RAB7BQ96AH8 199 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 CSPG4P5Q96PW8 444 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 EIF3CQ99613 913 aaKnown RBP17.92■□□□□ 0.46
PNKP-230ENST00000638016 PCDH18Q9HCL0 1135 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 KLHL11Q9NVR0 708 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 IPO11Q9UI26 975 aaKnown RBP17.92■□□□□ 0.46
PNKP-230ENST00000638016 KLF15Q9UIH9 416 aa17.92■□□□□ 0.46
PNKP-230ENST00000638016 APC2O95996 2303 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 H3BRJ5 948 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 SIGLEC6O43699 453 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 PALMO75781 387 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 GIMD1P0DJR0 217 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 DGKAP23743 735 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 ACADVLP49748 655 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 RAD51Q06609 339 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 SGCGQ13326 291 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 PIGHQ14442 188 aaPredicted RBP17.91■□□□□ 0.46
PNKP-230ENST00000638016 SKOR2Q2VWA4 1001 aaPredicted RBP17.91■□□□□ 0.46
PNKP-230ENST00000638016 ATP13A4Q4VNC1 1196 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 NYAP1Q6ZVC0 841 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 TMPRSS7Q7RTY8 843 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 PSTKQ8IV42 348 aaKnown RBP17.91■□□□□ 0.46
PNKP-230ENST00000638016 NIPA2Q8N8Q9 360 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 ZNF564Q8TBZ8 553 aaPredicted RBP17.91■□□□□ 0.46
PNKP-230ENST00000638016 CINPQ9BW66 212 aaPredicted RBP17.91■□□□□ 0.46
PNKP-230ENST00000638016 CPEB1Q9BZB8 566 aaKnown RBP17.91■□□□□ 0.46
PNKP-230ENST00000638016 TSPY26PQ9H489 355 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 SUV39H2Q9H5I1 410 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 PCDH12Q9NPG4 1184 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 MBNL1Q9NR56 388 aaKnown RBP17.91■□□□□ 0.46
PNKP-230ENST00000638016 DNAJC28Q9NX36 388 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 DKK3Q9UBP4 350 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 IP6K2Q9UHH9 426 aa17.91■□□□□ 0.46
PNKP-230ENST00000638016 PNMA8BQ9ULN7 279 aaPredicted RBP17.91■□□□□ 0.46
PNKP-230ENST00000638016 ZZEF1O43149 2961 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 TSPAN11A1L157 253 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 PIAS2O75928 621 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 NEBLO76041 1014 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 HNRNPH3P31942 346 aaKnown RBP17.9■□□□□ 0.46
PNKP-230ENST00000638016 SSR1P43307 286 aaKnown RBP17.9■□□□□ 0.46
PNKP-230ENST00000638016 HCAR3P49019 387 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 SLC10A7Q0GE19 358 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 PDE1CQ14123 709 aaPredicted RBP17.9■□□□□ 0.46
PNKP-230ENST00000638016 ACAP1Q15027 740 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 SRLQ86TD4 932 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 CXorf40AQ8TE69 158 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 TSC1Q92574 1164 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 CENPTQ96BT3 561 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 TCEAL2Q9H3H9 227 aaPredicted RBP17.9■□□□□ 0.46
PNKP-230ENST00000638016 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.9■□□□□ 0.46
PNKP-230ENST00000638016 HS3ST3A1Q9Y663 406 aa17.9■□□□□ 0.46
PNKP-230ENST00000638016 DMXL2Q8TDJ6 3036 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms