RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 NT5C1BQ96P26 610 aa9.38□□□□□ -0.91
CACNA1A-236ENST00000637117 MED15Q96RN5 788 aa9.38□□□□□ -0.91
CACNA1A-236ENST00000637117 CCNL2Q96S94 520 aaPredicted RBP9.38□□□□□ -0.91
CACNA1A-236ENST00000637117 TRIM62Q9BVG3 475 aa9.38□□□□□ -0.91
CACNA1A-236ENST00000637117 POPDC2Q9HBU9 364 aa9.38□□□□□ -0.91
CACNA1A-236ENST00000637117 DYRK4Q9NR20 520 aa9.38□□□□□ -0.91
CACNA1A-236ENST00000637117 NCKIPSDQ9NZQ3 722 aa9.38□□□□□ -0.91
CACNA1A-236ENST00000637117 VPS28Q9UK41 221 aa9.38□□□□□ -0.91
CACNA1A-236ENST00000637117 CSNK1G3Q9Y6M4 447 aa9.38□□□□□ -0.91
CACNA1A-236ENST00000637117 KIF26BQ2KJY2 2108 aa9.38□□□□□ -0.91
CACNA1A-236ENST00000637117 TRPM6Q9BX84 2022 aa9.38□□□□□ -0.91
CACNA1A-236ENST00000637117 RP1P56715 2156 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 FAM237AA0A1B0GTK4 181 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 PMS2P1A4D2B8 440 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 POM121BA6NF01 834 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 A6NNZ2 444 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 H3BM21 787 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 RNF103O00237 685 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 SLC16A3O15427 465 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 TCEA3O75764 348 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 STK10O94804 968 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 TNFSF15O95150 251 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 MT-CO1P00395 513 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 ARAFP10398 606 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 SLC2A3P11169 496 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 SRCP12931 536 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 NME1P15531 152 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 TFE3P19532 575 aaPredicted RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 PRCPP42785 496 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 PITX1P78337 314 aaPredicted RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 KRT83P78385 493 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 SRSF1Q07955 248 aaKnown RBP eCLIP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 PCDH1Q08174 1060 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 AUHQ13825 339 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 FZD2Q14332 565 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 LINC00303Q3SY05 128 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 ANKRD40Q6AI12 368 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 OR6B2Q6IFH4 312 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 CRTC1Q6UUV9 634 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 KRBA2Q6ZNG9 492 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 ERN2Q76MJ5 926 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 RRAGAQ7L523 313 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 PTAR1Q7Z6K3 402 aaPredicted RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 CLEC14AQ86T13 490 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 TMEM110Q86TL2 294 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 PPM1KQ8N3J5 372 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 ATP11CQ8NB49 1132 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 ZNF548Q8NEK5 533 aaPredicted RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 OR2A12Q8NGT7 310 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 WDR36Q8NI36 951 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 SLC35C1Q96A29 364 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 EAF1Q96JC9 268 aaPredicted RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 FEM1CQ96JP0 617 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 TSG101Q99816 390 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 HDAC8Q9BY41 377 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 SLC17A9Q9BYT1 436 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 TRIM4Q9C037 500 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 THAP9Q9H5L6 903 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 ARMCX3Q9UH62 379 aaPredicted RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 IPO11Q9UI26 975 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 KLF15Q9UIH9 416 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 TRIM33Q9UPN9 1127 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 HS3ST2Q9Y278 367 aa9.37□□□□□ -0.91
CACNA1A-236ENST00000637117 SYNJ2BP-COX16A0A087WUM0 186 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 SPTY2D1-AS1A0A0U1RR47 76 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 E5RJQ4 531 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 K7ERQ8 282 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 TPP1O14773 563 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 MUSKO15146 869 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 PMM2O15305 246 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 AQP9O43315 295 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 CLDN11O75508 207 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 GJB6O95452 261 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 PRNPP04156 253 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 CCR1P32246 355 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 RABIFP47224 123 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 FMO5P49326 533 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 IRAK1P51617 712 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 RPS26P62854 115 aaKnown RBP9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 RPS21P63220 83 aaKnown RBP9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 CDK17Q00537 523 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 PKP1Q13835 747 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 FGL2Q14314 439 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 NR0B2Q15466 257 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 TAF5Q15542 800 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 DEFB133Q30KQ1 61 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 COLEC12Q5KU26 742 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 DENND1BQ6P3S1 775 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 ADAMTSL4Q6UY14 1074 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 PARGQ86W56 976 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 GOLM1Q8NBJ4 401 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 CHST14Q8NCH0 376 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 LMO3Q8TAP4 145 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 LMX1AQ8TE12 382 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 SEC16BQ96JE7 1060 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 CCDC114Q96M63 670 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 IL12RB2Q99665 862 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 LACRTQ9GZZ8 138 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 FAM204AQ9H8W3 233 aa9.36□□□□□ -0.91
CACNA1A-236ENST00000637117 METTL14Q9HCE5 456 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms