RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 WDR45BQ5MNZ6 344 aa3.44□□□□□ -1.86
SRP54-214ENST00000630962 MAP3K21Q5TCX8 1036 aa3.44□□□□□ -1.86
SRP54-214ENST00000630962 C16orf82Q7Z2V1 217 aa3.44□□□□□ -1.86
SRP54-214ENST00000630962 MB21D2Q8IYB1 491 aaPredicted RBP3.44□□□□□ -1.86
SRP54-214ENST00000630962 AADATQ8N5Z0 425 aa3.44□□□□□ -1.86
SRP54-214ENST00000630962 C11orf65Q8NCR3 313 aa3.44□□□□□ -1.86
SRP54-214ENST00000630962 RASSF8Q8NHQ8 419 aa3.44□□□□□ -1.86
SRP54-214ENST00000630962 OR1F2PQ96R84 312 aa3.44□□□□□ -1.86
SRP54-214ENST00000630962 DDX31Q9H8H2 851 aaKnown RBP3.44□□□□□ -1.86
SRP54-214ENST00000630962 NDRG3Q9UGV2 375 aa3.44□□□□□ -1.86
SRP54-214ENST00000630962 ATXN2Q99700 1313 aaKnown RBP3.44□□□□□ -1.86
SRP54-214ENST00000630962 DYTNA2CJ06 578 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 LINC01553A4QN01 128 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 SMTNL1A8MU46 457 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 B9A039 149 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 CEP104O60308 925 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 SNRNP70P08621 437 aaKnown RBP3.43□□□□□ -1.86
SRP54-214ENST00000630962 SLC2A4P14672 509 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 PSMC2P35998 433 aaKnown RBP3.43□□□□□ -1.86
SRP54-214ENST00000630962 UBE3AQ05086 875 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 SLC12A1Q13621 1099 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 RUNX2Q13950 521 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 CTTNQ14247 550 aaKnown RBP3.43□□□□□ -1.86
SRP54-214ENST00000630962 NEDD9Q14511 834 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 NAA25Q14CX7 972 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 PPP6R3Q5H9R7 873 aaPredicted RBP3.43□□□□□ -1.86
SRP54-214ENST00000630962 C9orf57Q5W0N0 161 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 BBS12Q6ZW61 710 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 LRRC8DQ7L1W4 858 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 ADGRG6Q86SQ4 1221 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 CCDC105Q8IYK2 499 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 RBMXL3Q8N7X1 1067 aaKnown RBP3.43□□□□□ -1.86
SRP54-214ENST00000630962 LMO3Q8TAP4 145 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 GDPD5Q8WTR4 605 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 TMED6Q8WW62 240 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 ADGRG7Q96K78 797 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 TWNKQ96RR1 684 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 ARPC5LQ9BPX5 153 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 REEP2Q9BRK0 252 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 C1QTNF4Q9BXJ3 329 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 EPHX3Q9H6B9 360 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 ZNF556Q9HAH1 456 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 CLK4Q9HAZ1 481 aaKnown RBP3.43□□□□□ -1.86
SRP54-214ENST00000630962 OR6C3Q9NZP0 311 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 HCN3Q9P1Z3 774 aa3.43□□□□□ -1.86
SRP54-214ENST00000630962 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.43□□□□□ -1.86
SRP54-214ENST00000630962 CCDC196A0A1B0GTZ2 297 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 MAGEA13PA6NCF6 341 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 GAGE10A6NGK3 116 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 TTC36A6NLP5 189 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 KLK10O43240 276 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 ZBTB11O95625 1053 aaPredicted RBP3.42□□□□□ -1.86
SRP54-214ENST00000630962 IFIT1P09914 478 aaKnown RBP3.42□□□□□ -1.86
SRP54-214ENST00000630962 IGHV4-30-4P0DP06 118 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 IRF1P10914 325 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 PTPN9P43378 593 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 COMPP49747 757 aaPredicted RBP3.42□□□□□ -1.86
SRP54-214ENST00000630962 NR1H2P55055 460 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 CYP4A11Q02928 519 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.42□□□□□ -1.86
SRP54-214ENST00000630962 HYAL1Q12794 435 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 COASYQ13057 564 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 ITGADQ13349 1161 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 SNTA1Q13424 505 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 CAPSQ13938 189 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 TAF5Q15542 800 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 TAF12Q16514 161 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 PRSS57Q6UWY2 283 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 CCDC129Q6ZRS4 1044 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 TBC1D26Q86UD7 250 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 MON1AQ86VX9 555 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 ZCCHC10Q8TBK6 192 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 BICD1Q96G01 975 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 YME1L1Q96TA2 773 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 SMYD2Q9NRG4 433 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 PPP1R14DQ9NXH3 145 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 IL1RAPL1Q9NZN1 696 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 HDAC6Q9UBN7 1215 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 CNOT7Q9UIV1 285 aaKnown RBP3.42□□□□□ -1.86
SRP54-214ENST00000630962 KCNG2Q9UJ96 466 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 CARD8Q9Y2G2 431 aa3.42□□□□□ -1.86
SRP54-214ENST00000630962 FAM90A7PA6NKC0 464 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 FAM90A22PA8MWA6 464 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 FAM90A12PA8MX19 464 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 FAM90A23PA8MXZ1 464 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 PER2O15055 1255 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 SLC25A17O43808 307 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 NBNO60934 754 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 PPP1R3DO95685 299 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 ZNF12P17014 697 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 DDX5P17844 614 aaKnown RBP3.41□□□□□ -1.86
SRP54-214ENST00000630962 RYKP34925 604 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 PGM1P36871 562 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 HALP42357 657 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 ERVFC1-1P60608 527 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 VAMP2P63027 116 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 ARHGEF6Q15052 776 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 HIST2H2ACQ16777 129 aaPredicted RBP3.41□□□□□ -1.86
SRP54-214ENST00000630962 XKR9Q5GH70 373 aa3.41□□□□□ -1.86
SRP54-214ENST00000630962 ATG16L1Q676U5 607 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 913 ms