RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 FZD4Q9ULV1 537 aa9.24□□□□□ -0.93
SPTAN1-219ENST00000629378 APOBEC2Q9Y235 224 aaKnown RBP9.24□□□□□ -0.93
SPTAN1-219ENST00000629378 CA5BQ9Y2D0 317 aa9.24□□□□□ -0.93
SPTAN1-219ENST00000629378 FREM2Q5SZK8 3169 aa9.24□□□□□ -0.93
SPTAN1-219ENST00000629378 TDRD6O60522 2096 aaKnown RBP9.24□□□□□ -0.93
SPTAN1-219ENST00000629378 IGF2RP11717 2491 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 A0A0D9SEW6 157 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 A0A1B0GTQ1 180 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 TMEM8BA6NDV4 472 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 FLRT2O43155 660 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 RAD51CO43502 376 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 SMAD6O43541 496 aaKnown RBP9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 ATP9BO43861 1147 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 PHF2O75151 1096 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 ENDOD1O94919 500 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 ADH1BP00325 375 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 CTSLP07711 333 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 SRCP12931 536 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 KRT10P13645 584 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 HOXB3P14651 431 aaPredicted RBP9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 H2AFXP16104 143 aaPredicted RBP9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 GLDCP23378 1020 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 KDELR1P24390 212 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 MCM3P25205 808 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 CD38P28907 300 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 CHRNA3P32297 505 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 PTPN7P35236 360 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 CCR5P51681 352 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 HDAC4P56524 1084 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 VSNL1P62760 191 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 DEUP1Q05D60 604 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 SULT2A1Q06520 285 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 SUZ12Q15022 739 aaKnown RBP9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 BRD3Q15059 726 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 SIX1Q15475 284 aaPredicted RBP9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 SLC25A52Q3SY17 297 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 C5orf22Q49AR2 442 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 BOLA3Q53S33 107 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 TTC39BQ5VTQ0 682 aaPredicted RBP9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 KAZNQ674X7 775 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 FBXO38Q6PIJ6 1188 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 C19orf48Q6RUI8 117 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 LINGO4Q6UY18 593 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 MAATS1Q7Z4T9 603 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 TFAP2DQ7Z6R9 452 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 SPATS2Q86XZ4 545 aaKnown RBP9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 SH2D3CQ8N5H7 860 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 CHST14Q8NCH0 376 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 PIP4K2CQ8TBX8 421 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 MDM1Q8TC05 714 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 NT5C3BQ969T7 300 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 SERAC1Q96JX3 654 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 HERPUD2Q9BSE4 406 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 MUC3BQ9H195 1237 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 SLC25A13Q9UJS0 675 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 VPS28Q9UK41 221 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 PPM1HQ9ULR3 514 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 STAP1Q9ULZ2 295 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 TBC1D30Q9Y2I9 924 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 ACTL7AQ9Y615 435 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 CHD6Q8TD26 2715 aa9.23□□□□□ -0.93
SPTAN1-219ENST00000629378 hCG_1818297A0A087WSY0 165 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 C3orf70A6NLC5 250 aaPredicted RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 DRGXA6NNA5 263 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 TLR4O00206 839 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 MCF2LO15068 1137 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 PCDHGA12O60330 932 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 CLDN11O75508 207 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 DKK1O94907 266 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 HEXIM1O94992 359 aaKnown RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 TJP3O95049 919 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 RHOCP08134 193 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 COILP38432 576 aaPredicted RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 CDKN2BP42772 138 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 CCT8P50990 548 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 CDH4P55283 916 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 TAS2R38P59533 333 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 SFSWAPQ12872 951 aaKnown RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 DNAJC3Q13217 504 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 KLF1Q13351 362 aaPredicted RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 KRT81Q14533 505 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 ELAVL3Q14576 367 aaKnown RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 TAZQ16635 292 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 CYP1B1Q16678 543 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 TFDP3Q5H9I0 405 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 AGBL4Q5VU57 503 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 WDR93Q6P2C0 686 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 DHRS13Q6UX07 377 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 CYP4V2Q6ZWL3 525 aaPredicted RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 STRADAQ7RTN6 431 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 TMPRSS7Q7RTY8 843 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 IFT20Q8IY31 132 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 EID2Q8N6I1 236 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 ATP11CQ8NB49 1132 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 OR7D4Q8NG98 312 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 TEKT4Q8WW24 435 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 C1orf54Q8WWF1 131 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 OR8D1Q8WZ84 308 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 ARRDC3Q96B67 414 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 RUNDC3BQ96NL0 473 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms