RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-229ENST00000628515 SNX25Q9H3E2 840 aa16.27■□□□□ 0.19
NRXN1-229ENST00000628515 PRDM16Q9HAZ2 1276 aa16.27■□□□□ 0.19
NRXN1-229ENST00000628515 PFDN4Q9NQP4 134 aa16.27■□□□□ 0.19
NRXN1-229ENST00000628515 NCKIPSDQ9NZQ3 722 aa16.27■□□□□ 0.19
NRXN1-229ENST00000628515 IGSF9Q9P2J2 1179 aa16.27■□□□□ 0.19
NRXN1-229ENST00000628515 VPS28Q9UK41 221 aa16.27■□□□□ 0.19
NRXN1-229ENST00000628515 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.19
NRXN1-229ENST00000628515 TRPC5OSA6NMA1 111 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 FBP2O00757 339 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 PGK1P00558 417 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 STMN1P16949 149 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 TXNL4AP83876 142 aaKnown RBP16.26■□□□□ 0.19
NRXN1-229ENST00000628515 PRKCQQ04759 706 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 OGFOD2Q6N063 350 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 IL22Q9GZX6 179 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 ARMC7Q9H6L4 198 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 VRTNQ9H8Y1 702 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 TNFRSF12AQ9NP84 129 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 PIGVQ9NUD9 493 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 CROTQ9UKG9 612 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 SLCO1B7G3V0H7 640 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 CELF3Q5SZQ8 465 aaKnown RBP16.26■□□□□ 0.19
NRXN1-229ENST00000628515 SPPL2CQ8IUH8 684 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 STYXQ8WUJ0 223 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 CENPIQ92674 756 aaPredicted RBP16.26■□□□□ 0.19
NRXN1-229ENST00000628515 FBXL20Q96IG2 436 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 SLC45A3Q96JT2 553 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 NAA50Q9GZZ1 169 aaKnown RBP16.26■□□□□ 0.19
NRXN1-229ENST00000628515 GIMAP2Q9UG22 337 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 DOCK3Q8IZD9 2030 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 J3QRK9 145 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 CYP2B6P20813 491 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 GABRB3P28472 473 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 CD68P34810 354 aaPredicted RBP16.26■□□□□ 0.19
NRXN1-229ENST00000628515 ALDH3B2P48448 385 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 CSE1LP55060 971 aaKnown RBP16.26■□□□□ 0.19
NRXN1-229ENST00000628515 C1QTNF8P60827 252 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 LAMC2Q13753 1193 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 USP41Q3LFD5 358 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 TMEM26Q6ZUK4 368 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 TMEM151AQ8N4L1 468 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 C2orf69Q8N8R5 385 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 GFM2Q969S9 779 aaKnown RBP16.26■□□□□ 0.19
NRXN1-229ENST00000628515 FBXL8Q96CD0 374 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 LRCH3Q96II8 777 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 GPR22Q99680 433 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 C1QTNF1Q9BXJ1 281 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 RHOJQ9H4E5 214 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 ZNF385DQ9H6B1 395 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 GOLGA2P5Q9HBQ8 144 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 LRRC4Q9HBW1 653 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 TBC1D23Q9NUY8 699 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 SMOXQ9NWM0 555 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 PAIP2BQ9ULR5 123 aaKnown RBP16.26■□□□□ 0.19
NRXN1-229ENST00000628515 PADI4Q9UM07 663 aa16.26■□□□□ 0.19
NRXN1-229ENST00000628515 NR5A2O00482 541 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 ATE1O95260 518 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 MT-CYBP00156 380 aaPredicted RBP16.25■□□□□ 0.19
NRXN1-229ENST00000628515 AKAP5P24588 427 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 ZNF157P51786 506 aaPredicted RBP16.25■□□□□ 0.19
NRXN1-229ENST00000628515 CTBSQ01459 385 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 CAPRIN1Q14444 709 aaKnown RBP16.25■□□□□ 0.19
NRXN1-229ENST00000628515 HERC3Q15034 1050 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 SLC25A52Q3SY17 297 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 HOMEZQ8IX15 550 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 BBS5Q8N3I7 341 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 NPWQ8N729 165 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 ANKRD52Q8NB46 1076 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 HEXDCQ8WVB3 486 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 MED10Q9BTT4 135 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 POLR1BQ9H9Y6 1135 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 CDHR5Q9HBB8 845 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 SUCOQ9UBS9 1254 aaKnown RBP16.25■□□□□ 0.19
NRXN1-229ENST00000628515 SLC8A2Q9UPR5 921 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 HBP1O60381 514 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 EEF1B2P24534 225 aaKnown RBP16.25■□□□□ 0.19
NRXN1-229ENST00000628515 BNIP3Q12983 259 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 PLCL1Q15111 1095 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 LDLRAD1Q5T700 205 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 MFSD4BQ5TF39 518 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 ZDHHC17Q8IUH5 632 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 SIX6OS1Q8N1H7 587 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 ZC3H15Q8WU90 426 aaKnown RBP16.25■□□□□ 0.19
NRXN1-229ENST00000628515 MS4A4AQ96JQ5 239 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 RANBP9Q96S59 729 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 SMARCAD1Q9H4L7 1026 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 CXorf21Q9HAI6 301 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 SLC2A6Q9UGQ3 507 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 SIP14410 1827 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 ANK1P16157 1881 aa16.25■□□□□ 0.19
NRXN1-229ENST00000628515 ZNF638Q14966 1978 aaKnown RBP16.25■□□□□ 0.19
NRXN1-229ENST00000628515 A0A087WXM4 84 aa16.24■□□□□ 0.19
NRXN1-229ENST00000628515 SLC25A27O95847 323 aa16.24■□□□□ 0.19
NRXN1-229ENST00000628515 SNRPB2P08579 225 aaKnown RBP16.24■□□□□ 0.19
NRXN1-229ENST00000628515 ATP6V1B2P21281 511 aa16.24■□□□□ 0.19
NRXN1-229ENST00000628515 KCNA5P22460 613 aa16.24■□□□□ 0.19
NRXN1-229ENST00000628515 SLC7A1P30825 629 aa16.24■□□□□ 0.19
NRXN1-229ENST00000628515 TAS2R39P59534 338 aa16.24■□□□□ 0.19
NRXN1-229ENST00000628515 ESRP1Q6NXG1 681 aaKnown RBP16.24■□□□□ 0.19
NRXN1-229ENST00000628515 STRADAQ7RTN6 431 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms