RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 GATAD2AQ86YP4 633 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 ELAC2Q9BQ52 826 aaKnown RBP11.17□□□□□ -0.62
VPS8-227ENST00000625842 SERINC1Q9NRX5 453 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 NUDT5Q9UKK9 219 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 COG5Q9UP83 839 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 A0A087X0B3 334 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 TRAFD1O14545 582 aaPredicted RBP11.17□□□□□ -0.62
VPS8-227ENST00000625842 CNOT3O75175 753 aaKnown RBP11.17□□□□□ -0.62
VPS8-227ENST00000625842 CYB5AP00167 134 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 RHOQP17081 205 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 SERPINB3P29508 390 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 TIE1P35590 1138 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 SSR2P43308 183 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 ATP6V0D1P61421 351 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 AMZ1Q400G9 498 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 ZNF470Q6ECI4 717 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 NEPROQ6NW34 567 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 NEK10Q6ZWH5 1172 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 SAPCD2Q86UD0 394 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 FAM129CQ86XR2 697 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 SH3RF2Q8TEC5 729 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 SELENOMQ8WWX9 145 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 ZBTB9Q96C00 473 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 S100A3P33764 101 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 GJA9P57773 515 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 KCNMA1Q12791 1236 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 PTGES3Q15185 160 aaKnown RBP11.17□□□□□ -0.62
VPS8-227ENST00000625842 MEA1Q16626 185 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 KCNMB4Q86W47 210 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 UNC5BQ8IZJ1 945 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 TMEM156Q8N614 296 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 DCAKDQ8WVC6 231 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 HIST1H2AAQ96QV6 131 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 P2RY13Q9BPV8 354 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 APOL2Q9BQE5 337 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 RERGLQ9H628 205 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 EXOSC4Q9NPD3 245 aaKnown RBP11.17□□□□□ -0.62
VPS8-227ENST00000625842 AMACRQ9UHK6 382 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 E5RJQ4 531 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 NOL4O94818 638 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 SNUPNO95149 360 aaKnown RBP11.17□□□□□ -0.62
VPS8-227ENST00000625842 NUDT1P36639 197 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 COILP38432 576 aaPredicted RBP11.17□□□□□ -0.62
VPS8-227ENST00000625842 CXCR3P49682 368 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 CLCN5P51795 746 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 GTF2BQ00403 316 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 ANGPT1Q15389 498 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 FAM187BQ17R55 369 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 PRMT9Q6P2P2 845 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.17□□□□□ -0.62
VPS8-227ENST00000625842 EMC1Q8N766 993 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 BADQ92934 168 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 C19orf60Q96EN9 201 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 PACSIN1Q9BY11 444 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 LDAHQ9H6V9 325 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 PNPLA8Q9NP80 782 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 GEMIN8Q9NWZ8 242 aaKnown RBP11.17□□□□□ -0.62
VPS8-227ENST00000625842 HMGXB4Q9UGU5 601 aa11.17□□□□□ -0.62
VPS8-227ENST00000625842 FAM205CA6NFA0 338 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 RNF103O00237 685 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 PSMD10O75832 226 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 PCCBP05166 539 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 UGT1A1P22309 533 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 TRIM32Q13049 653 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 TRIM40Q6P9F5 258 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 SLC26A11Q86WA9 606 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 ADAM32Q8TC27 787 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 CPNE1Q99829 537 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 WDR26Q9H7D7 661 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 SMURF2Q9HAU4 748 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 PCDH9Q9HC56 1237 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 WDR6Q9NNW5 1121 aaKnown RBP11.16□□□□□ -0.62
VPS8-227ENST00000625842 A0A1B0GTH6 734 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 SLC38A8A6NNN8 435 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 CD3EAPO15446 510 aaKnown RBP11.16□□□□□ -0.62
VPS8-227ENST00000625842 TACR2P21452 398 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 AMPD1P23109 780 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 PPIBP23284 216 aaKnown RBP11.16□□□□□ -0.62
VPS8-227ENST00000625842 ACTR1BP42025 376 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 MATKP42679 507 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 CCDC153Q494R4 210 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 KCNT1Q5JUK3 1230 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 LDLRAP1Q5SW96 308 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 TXNDC11Q6PKC3 985 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 CASP12Q6UXS9 341 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 RGS9BPQ6ZS82 235 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 CAND1Q86VP6 1230 aaKnown RBP11.16□□□□□ -0.62
VPS8-227ENST00000625842 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 HPS4Q9NQG7 708 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 KBTBD4Q9NVX7 518 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 UBP1Q9NZI7 540 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 SLC9A8Q9Y2E8 581 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 RBM7Q9Y580 266 aaKnown RBP11.16□□□□□ -0.62
VPS8-227ENST00000625842 CYP3A7-CYP3A51PA0A087WV96 503 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 A0A096LPK6 155 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 A8MX80 341 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 SERPINB7O75635 380 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 CYP3A7P24462 503 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 FMO4P31512 558 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms