RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MAGEH1Q9H213 219 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 TAS2R1Q9NYW7 299 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 RUVBL2Q9Y230 463 aaKnown RBP19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 TK2O00142 265 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 GSC2O15499 205 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 GJB5O95377 273 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 SBK3P0C264 359 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 ATXN1LP0C7T5 689 aaKnown RBP19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 HMGA1P17096 107 aaKnown RBP19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 PGGT1BP53609 377 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 PRKAA2P54646 552 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 ALDH18A1P54886 795 aaKnown RBP19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 POU4F1Q01851 419 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 KIAA1841Q6NSI8 718 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 RINLQ6ZS11 566 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 DNAJC5GQ8N7S2 189 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 STYXQ8WUJ0 223 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 ELMO2Q96JJ3 720 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 TOX2Q96NM4 488 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 SEMA3CQ99985 751 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 HSFX1Q9UBD0 423 aa19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 APOBEC2Q9Y235 224 aaKnown RBP19.89■□□□□ 0.77
PCDHB11-202ENST00000624887 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 TARM1B6A8C7 271 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 COCHO43405 550 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 SEC24AO95486 1093 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 HSPA4LO95757 839 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 IDH3AP50213 366 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 C1QTNF8P60827 252 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 BTG3Q14201 252 aaPredicted RBP19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 ZNF235Q14590 738 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 RABGAP1LQ5R372 815 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 LIPMQ5VYY2 423 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 FSTL5Q8N475 847 aaPredicted RBP19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 ZNF461Q8TAF7 563 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 GATA5Q9BWX5 397 aaPredicted RBP19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 A0A0D9SEW6 157 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 MUSKO15146 869 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 ABLIM3O94929 683 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 ENO1P06733 434 aaKnown RBP19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 MYL4P12829 197 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 HOXD9P28356 352 aaPredicted RBP19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 LEPRP48357 1165 aaKnown RBP19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 CDH4P55283 916 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 TAS2R39P59534 338 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 GNA12Q03113 381 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 TLE2Q04725 743 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 IKBKEQ14164 716 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 ZNF460Q14592 562 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 TRIM60Q495X7 471 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 WASHC2DQ5SRD0 308 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 C1orf53Q5VUE5 145 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 ALG1LQ6GMV1 187 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 LRRC8EQ6NSJ5 796 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 GALNT7Q86SF2 657 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 GPATCH11Q8N954 259 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 PLD4Q96BZ4 506 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 FEM1CQ96JP0 617 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 SCYL1Q96KG9 808 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 MYRFLQ96LU7 910 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 GPR78Q96P69 363 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 TAGLN3Q9UI15 199 aa19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 ZFP37Q9Y6Q3 630 aaPredicted RBP19.88■□□□□ 0.77
PCDHB11-202ENST00000624887 A0A087X1B8 175 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 H3BNC9 293 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 SLC7A4O43246 635 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 KLHL2O95198 593 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 EPOP01588 193 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 AOC1P19801 751 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 GLRBP48167 497 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 CNSTQ6PJW8 725 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 TEX9Q8N6V9 391 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 ZNF781Q8N8C0 355 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 OMDQ99983 421 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 CDH19Q9H159 772 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 COL4A6Q14031 1691 aa19.87■□□□□ 0.77
PCDHB11-202ENST00000624887 PRR5-ARHGAP8B1AHC4 643 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 AURKAO14965 403 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 GJB3O75712 270 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 SOD2P04179 222 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 HLA-DPA1P20036 260 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 ARHGAP8P85298 464 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 TSNAXIP1Q2TAA8 658 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 TPGS2Q68CL5 300 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 CNKSR3Q6P9H4 555 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 DENND1CQ8IV53 801 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 DIS3LQ8TF46 1054 aaKnown RBP19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 ARMC5Q96C12 935 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 NXNL1Q96CM4 212 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 IFT43Q96FT9 208 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 MMADHCQ9H3L0 296 aaPredicted RBP19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 MFSD1Q9H3U5 465 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 TRPM5Q9NZQ8 1165 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 L3MBTL1Q9Y468 752 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 LDB2O43679 373 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 FGF1P05230 155 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 CLCN5P51795 746 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 SLC12A2P55011 1212 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms