RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 GPR156Q8NFN8 814 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 OR52N1Q8NH53 320 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 DNAJA4Q8WW22 397 aaPredicted RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 GPKOWQ92917 476 aaPredicted RBP eCLIP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 NTAN1Q96AB6 310 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SLC25A36Q96CQ1 311 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 PHF21BQ96EK2 531 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 QRFPRQ96P65 431 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 ACBD6Q9BR61 282 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 MTG1Q9BT17 334 aaPredicted RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 POTEKPQ9BYX7 375 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 ANKRD2Q9GZV1 360 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 RIMS4Q9H426 269 aaPredicted RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 OSGEPL1Q9H4B0 414 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SMPD3Q9NY59 655 aaPredicted RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 TMOD2Q9NZR1 351 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 AFF4Q9UHB7 1163 aaKnown RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 GRIN2DO15399 1336 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 A0A0U1RQJ8 604 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 ZNF716A6NP11 495 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 FAM227AF5H4B4 570 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 EML1O00423 815 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 POLR1CO15160 346 aaPredicted RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SIAH2O43255 324 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 ADAM20O43506 726 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SHOX2O60902 331 aaPredicted RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SPDEFO95238 335 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 CKMP06732 381 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 ZNF735P0CB33 412 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 RPA1P27694 616 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 GNA11P29992 359 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 GP5P40197 560 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SLC1A4P43007 532 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 GABRB2P47870 512 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 STX17P56962 302 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SPCS3P61009 180 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 RAB4BP61018 213 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 MAB21L1Q13394 359 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 ZNF829Q3KNS6 432 aaPredicted RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 LSM12Q3MHD2 195 aaKnown RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 TCP11X2Q5H9J9 407 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 GLRA4Q5JXX5 417 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SFRP5Q5T4F7 317 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 VITQ6UXI7 678 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 ADAMTSL4Q6UY14 1074 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 COLCA1Q6ZS62 124 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 USP49Q70CQ1 688 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 FAM122BQ7Z309 247 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 UBE3BQ7Z3V4 1068 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SZRD1Q7Z422 152 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 THAP5Q7Z6K1 395 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 ADGRA1Q86SQ6 560 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SCN4BQ8IWT1 228 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 KIRREL3Q8IZU9 778 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 ANKRD13CQ8N6S4 541 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 BBS1Q8NFJ9 593 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 CCDC12Q8WUD4 166 aaPredicted RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 PPP1R14AQ96A00 147 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SLC9A7Q96T83 725 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 UHRF1Q96T88 793 aaPredicted RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 KCNS3Q9BQ31 491 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 BBS2Q9BXC9 721 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 MRPL4Q9BYD3 311 aaKnown RBP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 TRIM39Q9HCM9 518 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 ERVK-5Q9HDB9 667 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 LATS2Q9NRM7 1088 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SERPINB13Q9UIV8 391 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 PUS1Q9Y606 427 aaKnown RBP eCLIP4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 FAM205AQ6ZU69 1335 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 SNED1Q8TER0 1413 aa4.13□□□□□ -1.75
UBE2D3-233ENST00000618836 DDX60Q8IY21 1712 aaKnown RBP4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 UPK3BL1B0FP48 263 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 UPK3BL2E5RIL1 263 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 H0Y8G0 127 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 H0YJX3 145 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 EIF1AYO14602 144 aaKnown RBP4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 PSMA7O14818 248 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 KIAA0355O15063 1070 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 VEGFDO43915 354 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 KRT36O76013 467 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 MFN2O95140 757 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 VNN2O95498 520 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 ADH1CP00326 375 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 MLNP12872 115 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 ACPPP15309 386 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 CCND1P24385 295 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 GTF2H1P32780 548 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 CAPGP40121 348 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 LMAN1P49257 510 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 AP1S2P56377 157 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 AMPD2Q01433 879 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 PTSQ03393 145 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 PTPN11Q06124 597 aaPredicted RBP4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 EPS8Q12929 822 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 GPS1Q13098 491 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 PAK1Q13153 545 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 MAPK7Q13164 816 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 ART3Q13508 389 aa4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 THOC5Q13769 683 aaKnown RBP4.12□□□□□ -1.75
UBE2D3-233ENST00000618836 CAPRIN1Q14444 709 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms