RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 PTGER2P43116 358 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 SIK1P57059 783 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 PPP1R8Q12972 351 aaKnown RBP13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 PXDC1Q5TGL8 231 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 TATDN1Q6P1N9 297 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 TMEM126BQ8IUX1 230 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 VGLL2Q8N8G2 317 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 KCNN1Q92952 543 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 MOCOSQ96EN8 888 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 RGS17Q9UGC6 210 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 TSR3Q9UJK0 312 aaKnown RBP13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 GINS2Q9Y248 185 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 OR7A10O76100 309 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 FTH1P02794 183 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 KLRK1P26718 216 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 CCT8P50990 548 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 SIM2Q14190 667 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 KIZQ2M2Z5 673 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZNF284Q2VY69 593 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZNF773Q6PK81 442 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 HIPK1Q86Z02 1210 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 STX19Q8N4C7 294 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 MCOLN3Q8TDD5 553 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 RIOX1Q9H6W3 641 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 PCDHB12Q9Y5F1 795 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 C4AP0C0L4 1744 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 C4BP0C0L5 1744 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZNF99A8MXY4 864 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 SNAP29O95721 258 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 ERCC2P18074 760 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 DSG3P32926 999 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 PTPN7P35236 360 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 SUZ12Q15022 739 aaKnown RBP13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 PDK2Q15119 407 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 TRIQKQ629K1 86 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 EID3Q8N140 333 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 NAT8LQ8N9F0 302 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 URGCPQ8TCY9 931 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 MUS81Q96NY9 551 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 FUNDC2Q9BWH2 189 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 RASSF1Q9NS23 344 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 KLQ9UEF7 1012 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 RIMS3Q9UJD0 308 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 CLRN2A0PK11 232 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 PDE9AO76083 593 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 NDUFB10O96000 172 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 HMGCRP04035 888 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 F7P08709 466 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 SNRPD2P62316 118 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 APOFQ13790 326 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 FAM209AQ5JX71 171 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZNF517Q6ZMY9 492 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 R3HCC1LQ7Z5L2 792 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 BPHLQ86WA6 291 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 PAWRQ96IZ0 340 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 RHOBTB2Q9BYZ6 727 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 ING3Q9NXR8 418 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 TRAF6Q9Y4K3 522 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 ATP8B3O60423 1300 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 ATG7O95352 703 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 MTHFD1P11586 935 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 TPH1P17752 444 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 NAB1Q13506 487 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 REP15Q6BDI9 236 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 TXNRD3NBQ6F5E7 133 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 PLET1Q6UQ28 207 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 OTOP3Q7RTS5 596 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 LYSMD3Q7Z3D4 306 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 CHERPQ8IWX8 916 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 COLGALT1Q8NBJ5 622 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 NARS2Q96I59 477 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 TDRD1Q9BXT4 1180 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 TMEM245Q9H330 911 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 TBX20Q9UMR3 447 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 PCDHA2Q9Y5H9 948 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 SLC22A1O15245 554 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 ANGPTL1O95841 491 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 ETV4P43268 484 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 CCNA1P78396 465 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 GALNT5Q7Z7M9 940 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 DTX3Q8N9I9 347 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 POMKQ9H5K3 350 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 OLAHQ9NV23 265 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 FBXO40Q9UH90 709 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 C3orf18Q9UK00 162 aa13.65□□□□□ -0.22
PPP4R3B-205ENST00000616288 TMEM150BA6NC51 233 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 NOBOXO60393 691 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 SOAT2O75908 522 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 CD48P09326 243 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 SPATA31C1P0DKV0 1188 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 HDCP19113 662 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 IL32P24001 234 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 CDKN2BP42772 138 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 RACK1P63244 317 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 PPP2R2BQ00005 443 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 SIGIRRQ6IA17 410 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 DESI1Q6ICB0 168 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 ERICH5Q6P6B1 374 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 ANGPTL8Q6UXH0 198 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 ZNF668Q96K58 619 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms