RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 UGT2A1Q9Y4X1 527 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 PCDHGA7Q9Y5G6 932 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 PCDHGA11Q9Y5H2 935 aa10.47□□□□□ -0.73
TNFAIP3-208ENST00000615468 TBKBP1A7MCY6 615 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 M0QX08 132 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 APOL1O14791 398 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 GCATO75600 419 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 TSPAN9O75954 239 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 C1QAP02745 245 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 ASNSP08243 561 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 CCDC159P0C7I6 412 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 TBXAS1P24557 533 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 AVPR1AP37288 418 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 CASP2P42575 452 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 RPS9P46781 194 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 PGGT1BP53609 377 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 SLC25A11Q02978 314 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 FPGSQ05932 587 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 PDK2Q15119 407 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 FAM102AQ5T9C2 384 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 ASCC1Q8N9N2 400 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 TRIM15Q9C019 465 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 VPS33BQ9H267 617 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 PCDHGA8Q9Y5G5 932 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 C16orf96A6NNT2 1141 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 PDZK1P1A8MUH7 402 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 A8MV72 311 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 TMCC2O75069 709 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 RFPL2O75678 378 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 MBL2P11226 248 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 ITIH1P19827 911 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 HLCSP50747 726 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 GNG2P59768 71 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 RACK1P63244 317 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 TUBA1BP68363 451 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 GALNT2Q10471 571 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 HERC3Q15034 1050 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 MAPRE2Q15555 327 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 DGUOKQ16854 277 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 KIF19Q2TAC6 998 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 SNAP47Q5SQN1 464 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 ZNF773Q6PK81 442 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 TIFABQ6ZNK6 161 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 TUBA1AQ71U36 451 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 KIAA0319LQ8IZA0 1049 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 ANKFN1Q8N957 763 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 SPERTQ8NA61 448 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 MUS81Q96NY9 551 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 PGLYRP2Q96PD5 576 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 PIF1Q9H611 641 aa10.46□□□□□ -0.73
TNFAIP3-208ENST00000615468 ADAMTSL1Q8N6G6 1762 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 CENPBD1B2RD01 187 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 VWA5AO00534 786 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 IL7RP16871 459 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 ACO1P21399 889 aaKnown RBP10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 SPRP35270 261 aaPredicted RBP10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 GP5P40197 560 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 ARPP19P56211 112 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 ZACNQ401N2 412 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 PTPN20Q4JDL3 420 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 SYTL1Q8IYJ3 562 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 LGI2Q8N0V4 545 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 PSD4Q8NDX1 1056 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 TMEM161BQ8NDZ6 487 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 HDAC10Q969S8 669 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 SDCCAG3Q96C92 435 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 MAGED4Q96JG8 741 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 CSF3RQ99062 836 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 ADPGKQ9BRR6 497 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 ACE2Q9BYF1 805 aaPredicted RBP10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 VRTNQ9H8Y1 702 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 PLAC1Q9HBJ0 212 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 TBC1D13Q9NVG8 400 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 SNTG2Q9NY99 539 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 GGA3Q9NZ52 723 aa10.46□□□□□ -0.74
TNFAIP3-208ENST00000615468 BMP2P12643 396 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 ATP6V1B2P21281 511 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 TGM1P22735 817 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 GEN1Q17RS7 908 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 LRIT3Q3SXY7 679 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 SLC36A3Q495N2 470 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 STXBP5Q5T5C0 1151 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 SH3PXD2AQ5TCZ1 1133 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 REP15Q6BDI9 236 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 PLD3Q8IV08 490 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 SLC38A6Q8IZM9 456 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 SCML4Q8N228 414 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 SGCDQ92629 289 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 CENPNQ96H22 339 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 CEP170P1Q96L14 293 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 ZNF641Q96N77 438 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 OMDQ99983 421 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 CD320Q9NPF0 282 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 ASNSD1Q9NWL6 643 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 FAM155AB1AL88 458 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 AGRPO00253 132 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 UBDO15205 165 aa10.45□□□□□ -0.74
TNFAIP3-208ENST00000615468 DYRK3O43781 588 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms