RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 PDGFRAP16234 1089 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 HMGA1P17096 107 aaKnown RBP7.57□□□□□ -1.2
FAM228B-209ENST00000615135 GABRG2P18507 467 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 ATF6P18850 670 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 MIPP30301 263 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 RFC1P35251 1148 aaPredicted RBP7.57□□□□□ -1.2
FAM228B-209ENST00000615135 CHKAP35790 457 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 EIF2DP41214 584 aaKnown RBP7.57□□□□□ -1.2
FAM228B-209ENST00000615135 CDKN2BP42772 138 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 TNFRSF4P43489 277 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 GABRB2P47870 512 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 ATP5OP48047 213 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 SULT1E1P49888 294 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 IDH3AP50213 366 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 ZNF143P52747 638 aaPredicted RBP7.57□□□□□ -1.2
FAM228B-209ENST00000615135 UCNP55089 124 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 EIF3EP60228 445 aaKnown RBP7.57□□□□□ -1.2
FAM228B-209ENST00000615135 MAGOHP61326 146 aaKnown RBP7.57□□□□□ -1.2
FAM228B-209ENST00000615135 BASP1P80723 227 aaKnown RBP7.57□□□□□ -1.2
FAM228B-209ENST00000615135 ATP11AP98196 1134 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 OTUD4Q01804 1114 aaKnown RBP7.57□□□□□ -1.2
FAM228B-209ENST00000615135 BNC1Q01954 994 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 VEPH1Q14D04 833 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 SUZ12Q15022 739 aaKnown RBP7.57□□□□□ -1.2
FAM228B-209ENST00000615135 TMED2Q15363 201 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 HLA-BQ31612 363 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 WDR45BQ5MNZ6 344 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 SYCP2LQ5T4T6 812 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 TXNDC8Q6A555 127 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 SCYL2Q6P3W7 929 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 DHRS13Q6UX07 377 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 MICALCLQ6ZW33 695 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 BBS12Q6ZW61 710 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 CENPUQ71F23 418 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 PCGF5Q86SE9 256 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 ZDHHC17Q8IUH5 632 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 MAP7D3Q8IWC1 876 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 IQCKQ8N0W5 287 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 SIX6OS1Q8N1H7 587 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 CACTIN-AS1Q8N1I8 211 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 SPATA18Q8TC71 538 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 FAM172AQ8WUF8 416 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 DYDC1Q8WWB3 177 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 RXFP2Q8WXD0 754 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 FAM149B1Q96BN6 582 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 LPIN3Q9BQK8 851 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 CCDC77Q9BR77 488 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 HERPUD2Q9BSE4 406 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 FAM107BQ9H098 131 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 LINC00597Q9H2U6 94 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 DPEP3Q9H4B8 488 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 VPS37BQ9H9H4 285 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 CD248Q9HCU0 757 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 SAYSD1Q9NPB0 183 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 KRT82Q9NSB4 513 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 DNPEPQ9ULA0 475 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 SHOC2Q9UQ13 582 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 BTBD3Q9Y2F9 522 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 WNT6Q9Y6F9 365 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 AK5Q9Y6K8 562 aa7.57□□□□□ -1.2
FAM228B-209ENST00000615135 TLN1Q9Y490 2541 aaKnown RBP7.57□□□□□ -1.2
FAM228B-209ENST00000615135 SPTBN1Q01082 2364 aaKnown RBP7.56□□□□□ -1.2
FAM228B-209ENST00000615135 A0A087WUV0 522 aaPredicted RBP7.56□□□□□ -1.2
FAM228B-209ENST00000615135 EXOC1LA0A1B0GW35 172 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 CLEC18AA5D8T8 446 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 E7EVH7 732 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 TGFBR3LH3BV60 316 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 APOC4-APOC2K7ER74 178 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 PCDHGA12O60330 932 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 DAB1O75553 588 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 KIAA0754O94854 1291 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 ZBED1O96006 694 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 APOC2P02655 101 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 SHBGP04278 402 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 ITGAVP06756 1048 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 C1SP09871 688 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 FAM200BP0CF97 657 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 ODC1P11926 461 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 JUPP14923 745 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 TYMPP19971 482 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 CYP3A5P20815 502 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 TGM2P21980 687 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 WARSP23381 471 aaKnown RBP7.56□□□□□ -1.2
FAM228B-209ENST00000615135 KDELR1P24390 212 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 MZF1P28698 734 aaPredicted RBP7.56□□□□□ -1.2
FAM228B-209ENST00000615135 PHBP35232 272 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 PCK1P35558 622 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 HNF1BP35680 557 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 MATKP42679 507 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 GPD2P43304 727 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 SLCO1A2P46721 670 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 IFNAR2P48551 515 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 TMPRSS3P57727 454 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 SLC6A3Q01959 620 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 GUCY1A3Q02108 690 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 ADIGQ0VDE8 80 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 MORF4L2Q15014 288 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 C15orf59Q2T9L4 293 aaPredicted RBP7.56□□□□□ -1.2
FAM228B-209ENST00000615135 ATP13A4Q4VNC1 1196 aa7.56□□□□□ -1.2
FAM228B-209ENST00000615135 KCNT1Q5JUK3 1230 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms