RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 BBOF1Q8ND07 529 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 PIP4K2CQ8TBX8 421 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 HCAR2Q8TDS4 363 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 PBXIP1Q96AQ6 731 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 IFT43Q96FT9 208 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 PPP1R16AQ96I34 528 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 FSD1LQ9BXM9 530 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 LRRC40Q9H9A6 602 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 CD248Q9HCU0 757 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 TPX2Q9ULW0 747 aaKnown RBP14.85□□□□□ -0.03
CD48-203ENST00000613788 TNFRSF10AO00220 468 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 KPNA3O00505 521 aaPredicted RBP14.84□□□□□ -0.03
CD48-203ENST00000613788 RIOK3O14730 519 aaKnown RBP14.84□□□□□ -0.03
CD48-203ENST00000613788 PI15O43692 258 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 ALDH1A2O94788 518 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 PIGNO95427 931 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 AP2A1O95782 977 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 ADH1BP00325 375 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 UGT2B4P06133 528 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 CTSLP07711 333 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 APRTP07741 180 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 COPAP53621 1224 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 WNT3AP56704 352 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 POLR2LP62875 67 aaKnown RBP14.84□□□□□ -0.03
CD48-203ENST00000613788 SLC7A5Q01650 507 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 ZBTB16Q05516 673 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 CDK18Q07002 472 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 CCDC15Q0P6D6 951 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 SFSWAPQ12872 951 aaKnown RBP14.84□□□□□ -0.03
CD48-203ENST00000613788 MTAPQ13126 283 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 PCSK7Q16549 785 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 ZNF805Q5CZA5 627 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 ARMC12Q5T9G4 340 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 DUPD1Q68J44 220 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 NAPEPLDQ6IQ20 393 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 KDELC1Q6UW63 502 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 BMP8AQ7Z5Y6 402 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 TMPRSS6Q8IU80 811 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 IPMKQ8NFU5 416 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
CD48-203ENST00000613788 ERLEC1Q96DZ1 483 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 SNF8Q96H20 258 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 FEM1CQ96JP0 617 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 NSMCE3Q96MG7 304 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 KLHL32Q96NJ5 620 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 GORASP1Q9BQQ3 440 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 MLPHQ9BV36 600 aaPredicted RBP14.84□□□□□ -0.03
CD48-203ENST00000613788 TDRD1Q9BXT4 1180 aaKnown RBP14.84□□□□□ -0.03
CD48-203ENST00000613788 ADGRE3Q9BY15 652 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 TRIM31Q9BZY9 425 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 DYRK4Q9NR20 520 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 EIF2B3Q9NR50 452 aaKnown RBP14.84□□□□□ -0.03
CD48-203ENST00000613788 DLGAP2Q9P1A6 1054 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 SCML1Q9UN30 329 aa14.84□□□□□ -0.03
CD48-203ENST00000613788 MYO18AQ92614 2054 aaKnown RBP14.84□□□□□ -0.03
CD48-203ENST00000613788 TCRBV21S2A2A0A5A6 115 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 SMAPO00193 183 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 TRAFD1O14545 582 aaPredicted RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 DNALI1O14645 258 aaPredicted RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 HTRA2O43464 458 aaPredicted RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 HEXIM1O94992 359 aaKnown RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 DNTTP04053 509 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 ITIH2P19823 946 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 TPSB2P20231 275 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 C5AR1P21730 350 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 IVDP26440 423 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 SLC8A1P32418 973 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 CXCL12P48061 93 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 CCR3P51677 355 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 DRG2P55039 364 aaKnown RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 RPL26P61254 145 aaKnown RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 RPS14P62263 151 aaKnown RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 SARNPP82979 210 aaKnown RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 TRAF2Q12933 501 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 CALCOCO2Q13137 446 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 IHHQ14623 411 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 TPSAB1Q15661 275 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 CST6Q15828 149 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 KCTD19Q17RG1 926 aaPredicted RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 TEX35Q5T0J7 233 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 KCTD11Q693B1 232 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 BRAT1Q6PJG6 821 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 LINC00523Q86TU6 105 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 PPIL6Q8IXY8 311 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 NDUFAF2Q8N183 169 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 LRRN4CLQ8ND94 238 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 TSTD1Q8NFU3 115 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 PRCCQ92733 491 aaPredicted RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 SIPA1Q96FS4 1042 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 MRGPRX2Q96LB1 330 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 MKRN2Q9H000 416 aaKnown RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 DKK3Q9UBP4 350 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 SARDHQ9UL12 918 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 RPL26L1Q9UNX3 145 aaKnown RBP14.83□□□□□ -0.04
CD48-203ENST00000613788 CHKBQ9Y259 395 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 SNX24Q9Y343 169 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 PCDHB9Q9Y5E1 797 aa14.83□□□□□ -0.04
CD48-203ENST00000613788 LOC285095A0A1B0GVY8 99 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 AP3B1O00203 1094 aa14.82□□□□□ -0.04
CD48-203ENST00000613788 SUN1O94901 812 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms