RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PLEKHA6Q9Y2H5 1048 aa8.83□□□□□ -1
TTC28-208ENST00000612946 CRTAPO75718 401 aaPredicted RBP8.83□□□□□ -1
TTC28-208ENST00000612946 VNN2O95498 520 aa8.83□□□□□ -1
TTC28-208ENST00000612946 DLG2Q15700 870 aa8.83□□□□□ -1
TTC28-208ENST00000612946 PGS1Q32NB8 556 aa8.83□□□□□ -1
TTC28-208ENST00000612946 TBRG1Q3YBR2 411 aa8.83□□□□□ -1
TTC28-208ENST00000612946 ECHDC2Q86YB7 292 aa8.83□□□□□ -1
TTC28-208ENST00000612946 PDSS2Q86YH6 399 aa8.83□□□□□ -1
TTC28-208ENST00000612946 RPRD1AQ96P16 312 aaPredicted RBP8.83□□□□□ -1
TTC28-208ENST00000612946 MIPEPQ99797 713 aa8.83□□□□□ -1
TTC28-208ENST00000612946 EBF3Q9H4W6 596 aa8.83□□□□□ -1
TTC28-208ENST00000612946 CASKO14936 926 aa8.83□□□□□ -1
TTC28-208ENST00000612946 TPPPO94811 219 aa8.83□□□□□ -1
TTC28-208ENST00000612946 SCELO95171 688 aa8.83□□□□□ -1
TTC28-208ENST00000612946 CST1P01037 141 aa8.83□□□□□ -1
TTC28-208ENST00000612946 HOXD12P35452 270 aa8.83□□□□□ -1
TTC28-208ENST00000612946 GABARAPL2P60520 117 aa8.83□□□□□ -1
TTC28-208ENST00000612946 FADDQ13158 208 aa8.83□□□□□ -1
TTC28-208ENST00000612946 TCEAL5Q5H9L2 206 aa8.83□□□□□ -1
TTC28-208ENST00000612946 ZNF570Q96NI8 536 aa8.83□□□□□ -1
TTC28-208ENST00000612946 C8orf37Q96NL8 207 aa8.83□□□□□ -1
TTC28-208ENST00000612946 AIF1LQ9BQI0 150 aa8.83□□□□□ -1
TTC28-208ENST00000612946 SLC30A2Q9BRI3 323 aa8.83□□□□□ -1
TTC28-208ENST00000612946 MKS1Q9NXB0 559 aa8.83□□□□□ -1
TTC28-208ENST00000612946 ARID1BQ8NFD5 2236 aaPredicted RBP8.83□□□□□ -1
TTC28-208ENST00000612946 PAPSS1O43252 624 aaPredicted RBP8.82□□□□□ -1
TTC28-208ENST00000612946 SUV39H1O43463 412 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ZNF37AP17032 561 aaPredicted RBP8.82□□□□□ -1
TTC28-208ENST00000612946 ALDH9A1P49189 494 aa8.82□□□□□ -1
TTC28-208ENST00000612946 PGAP1Q75T13 922 aa8.82□□□□□ -1
TTC28-208ENST00000612946 FITM2Q8N6M3 262 aa8.82□□□□□ -1
TTC28-208ENST00000612946 SPPL2AQ8TCT8 520 aa8.82□□□□□ -1
TTC28-208ENST00000612946 NSUN6Q8TEA1 469 aaKnown RBP8.82□□□□□ -1
TTC28-208ENST00000612946 FRMD6Q96NE9 622 aa8.82□□□□□ -1
TTC28-208ENST00000612946 LMTK3Q96Q04 1460 aa8.82□□□□□ -1
TTC28-208ENST00000612946 TTC3P53804 2025 aa8.82□□□□□ -1
TTC28-208ENST00000612946 TFRCP02786 760 aaKnown RBP8.82□□□□□ -1
TTC28-208ENST00000612946 IGFBP5P24593 272 aa8.82□□□□□ -1
TTC28-208ENST00000612946 NME3Q13232 169 aa8.82□□□□□ -1
TTC28-208ENST00000612946 PON3Q15166 354 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ANKS6Q68DC2 871 aa8.82□□□□□ -1
TTC28-208ENST00000612946 HDDC3Q8N4P3 179 aa8.82□□□□□ -1
TTC28-208ENST00000612946 MFSD2AQ8NA29 543 aa8.82□□□□□ -1
TTC28-208ENST00000612946 RBM15BQ8NDT2 890 aaKnown RBP8.82□□□□□ -1
TTC28-208ENST00000612946 ASB12Q8WXK4 309 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ADGRE3Q9BY15 652 aa8.82□□□□□ -1
TTC28-208ENST00000612946 CSADQ9Y600 493 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ROBO3Q96MS0 1386 aa8.82□□□□□ -1
TTC28-208ENST00000612946 GATBO75879 557 aaKnown RBP8.82□□□□□ -1
TTC28-208ENST00000612946 ANGPTL1O95841 491 aa8.82□□□□□ -1
TTC28-208ENST00000612946 MYL3P08590 195 aa8.82□□□□□ -1
TTC28-208ENST00000612946 EPCAMP16422 314 aa8.82□□□□□ -1
TTC28-208ENST00000612946 GYG1P46976 350 aa8.82□□□□□ -1
TTC28-208ENST00000612946 FAM76BQ5HYJ3 339 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ADGRG6Q86SQ4 1221 aa8.82□□□□□ -1
TTC28-208ENST00000612946 TCTEX1D2Q8WW35 142 aa8.82□□□□□ -1
TTC28-208ENST00000612946 PLA2G12BQ9BX93 195 aa8.82□□□□□ -1
TTC28-208ENST00000612946 MIEF1Q9NQG6 463 aa8.82□□□□□ -1
TTC28-208ENST00000612946 PPRC1Q5VV67 1664 aaKnown RBP8.82□□□□□ -1
TTC28-208ENST00000612946 KBTBD13C9JR72 458 aa8.82□□□□□ -1
TTC28-208ENST00000612946 CYP1A2P05177 515 aa8.82□□□□□ -1
TTC28-208ENST00000612946 LCN1P31025 176 aa8.82□□□□□ -1
TTC28-208ENST00000612946 CD79BP40259 229 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ARFIP1P53367 373 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ILF3Q12906 894 aaKnown RBP eCLIP8.82□□□□□ -16e-6■□□□□ 8.6
TTC28-208ENST00000612946 MYBPC3Q14896 1274 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ADNP2Q6IQ32 1131 aa8.82□□□□□ -1
TTC28-208ENST00000612946 PGBD2Q6P3X8 592 aa8.82□□□□□ -1
TTC28-208ENST00000612946 RIOX2Q8IUF8 465 aa8.82□□□□□ -1
TTC28-208ENST00000612946 VANGL1Q8TAA9 524 aaPredicted RBP8.82□□□□□ -1
TTC28-208ENST00000612946 TAS2R13Q9NYV9 303 aa8.82□□□□□ -1
TTC28-208ENST00000612946 RPTORQ8N122 1335 aa8.82□□□□□ -1
TTC28-208ENST00000612946 AQP12BA6NM10 295 aa8.82□□□□□ -1
TTC28-208ENST00000612946 RLN1P04808 185 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ITGA4P13612 1032 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ITGALP20701 1170 aa8.82□□□□□ -1
TTC28-208ENST00000612946 GDI2P50395 445 aaKnown RBP8.82□□□□□ -1
TTC28-208ENST00000612946 AQP12AQ8IXF9 295 aa8.82□□□□□ -1
TTC28-208ENST00000612946 BAP1Q92560 729 aa8.82□□□□□ -1
TTC28-208ENST00000612946 SCGB3A2Q96PL1 93 aa8.82□□□□□ -1
TTC28-208ENST00000612946 GRHL1Q9NZI5 618 aa8.82□□□□□ -1
TTC28-208ENST00000612946 STXBP5LQ9Y2K9 1186 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ARAP3Q8WWN8 1544 aa8.82□□□□□ -1
TTC28-208ENST00000612946 PPLO60437 1756 aa8.82□□□□□ -1
TTC28-208ENST00000612946 SERPINB7O75635 380 aa8.82□□□□□ -1
TTC28-208ENST00000612946 SERPINA3P01011 423 aa8.82□□□□□ -1
TTC28-208ENST00000612946 TIGD4Q8IY51 512 aa8.82□□□□□ -1
TTC28-208ENST00000612946 PTCD2Q8WV60 388 aaKnown RBP8.82□□□□□ -1
TTC28-208ENST00000612946 DNAJA4Q8WW22 397 aaPredicted RBP8.82□□□□□ -1
TTC28-208ENST00000612946 ADAMTS10Q9H324 1103 aa8.82□□□□□ -1
TTC28-208ENST00000612946 MTRRQ9UBK8 725 aa8.82□□□□□ -1
TTC28-208ENST00000612946 JAG2Q9Y219 1238 aa8.82□□□□□ -1
TTC28-208ENST00000612946 TRIM3O75382 744 aaPredicted RBP8.82□□□□□ -1
TTC28-208ENST00000612946 HLA-DRAP01903 254 aa8.82□□□□□ -1
TTC28-208ENST00000612946 CHKAP35790 457 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ZNF410Q86VK4 478 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ZNF655Q8N720 491 aaPredicted RBP8.82□□□□□ -1
TTC28-208ENST00000612946 MCOLN3Q8TDD5 553 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ASB9Q96DX5 294 aa8.82□□□□□ -1
TTC28-208ENST00000612946 OSBPL7Q9BZF2 842 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms