RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 MANEAQ5SRI9 462 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 WDR78Q5VTH9 848 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 TMEM71Q6P5X7 295 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 TRAPPC11Q7Z392 1133 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 SLC46A3Q7Z3Q1 461 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 PIP4P1Q86T03 277 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 TBC1D26Q86UD7 250 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 KIAA2013Q8IYS2 634 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 MMP21Q8N119 569 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 ANKRD52Q8NB46 1076 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 CADM4Q8NFZ8 388 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 CEP76Q8TAP6 659 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 HMCESQ96FZ2 354 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 NUF2Q9BZD4 464 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 LHPPQ9H008 270 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 A4GNTQ9UNA3 340 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 LRP12Q9Y561 859 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 CACNA1IQ9P0X4 2223 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 LY6G6EA0A0G2JKS1 128 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 TTC36A6NLP5 189 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 SOCS2O14508 198 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 SEC14L2O76054 403 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 EPN2O95208 641 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 CLDN7O95471 211 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 PCNAP12004 261 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 EDN2P20800 178 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 PSMA4P25789 261 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 TTKP33981 857 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 CASP2P42575 452 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 EIF5P55010 431 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 CDH12P55289 794 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 RPS3AP61247 264 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 RPL7AP62424 266 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 SETQ01105 290 aaPredicted RBP4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 FOXD4Q12950 439 aaPredicted RBP4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 PPP2R5BQ15173 497 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 GSTA3Q16772 222 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 Q5PR19 223 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 GPATCH4Q5T3I0 446 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 NUGGCQ68CJ6 796 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 CES5AQ6NT32 575 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 CDC73Q6P1J9 531 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 CPLX2Q6PUV4 134 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 SLC16A12Q6ZSM3 486 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 ZNF548Q8NEK5 533 aaPredicted RBP4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 MCPH1Q8NEM0 835 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 BICD2Q8TD16 824 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 BBS4Q96RK4 519 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 YME1L1Q96TA2 773 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 PIP5K1AQ99755 562 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 WDR77Q9BQA1 342 aaPredicted RBP4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 H2AFJQ9BTM1 129 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 KLHL31Q9H511 634 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 MVB12BQ9H7P6 319 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 BRF2Q9HAW0 419 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 BLOC1S4Q9NUP1 217 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 CARD8Q9Y2G2 431 aa4.5□□□□□ -1.69
SMCHD1-213ENST00000609587 PI4KAP2A4QPH2 592 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 LRRC53A6NM62 1247 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 TGFB1I1O43294 461 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 ATP2C2O75185 946 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 CCNDBP1O95273 360 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 SYF2O95926 243 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 TMEM191BP0C7N4 346 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 CHRNB2P17787 502 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 ICAM3P32942 547 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 RYKP34925 604 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 BSGP35613 385 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 GABRB2P47870 512 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 PPP3CCP48454 512 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 GNAQP50148 359 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 CLCN5P51795 746 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 RARSP54136 660 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 CLDN2P57739 230 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 CAPSQ13938 189 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 ERV3-1Q14264 604 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 PTGR1Q14914 329 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 RNPS1Q15287 305 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 HIST2H2ACQ16777 129 aaPredicted RBP4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 PLEKHO1Q53GL0 409 aaPredicted RBP4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 TXNDC8Q6A555 127 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 TMED8Q6PL24 325 aaPredicted RBP4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 PARM1Q6UWI2 310 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 TMEM199Q8N511 208 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 NGEFQ8N5V2 710 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 ENGASEQ8NFI3 743 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 LPAR1Q92633 364 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 ZC3HAV1LQ96H79 300 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 SIN3AQ96ST3 1273 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 CHCHD6Q9BRQ6 235 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 POLDIP3Q9BY77 421 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 CDT1Q9H211 546 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 FOXP1Q9H334 677 aaPredicted RBP4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 PLEKHA5Q9HAU0 1116 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 DIAPH3Q9NSV4 1193 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 MAP3K20Q9NYL2 800 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 FAM96BQ9Y3D0 163 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 LAS1LQ9Y4W2 734 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 PSAT1Q9Y617 370 aa4.49□□□□□ -1.69
SMCHD1-213ENST00000609587 PIAS3Q9Y6X2 628 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms