RNA–Protein interactions for RNA: ENST00000602174.5

NAPA-222, Transcript of NSF attachment protein alpha, human

TSL 2

Gene NAPA, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAPA-222	ENST00000602174	CINP	Q9BW66	212 aa	Predicted RBP	11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	CEP41	Q9BYV8	373 aa		11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	CIPC	Q9C0C6	399 aa		11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	POLR1E	Q9GZS1	481 aa	Known RBP	11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	RAB17	Q9H0T7	212 aa		11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	GLOD4	Q9HC38	313 aa		11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	RBM22	Q9NW64	420 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	RALY	Q9UKM9	306 aa	Known RBP	11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	ANGPTL2	Q9UKU9	493 aa		11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	INVS	Q9Y283	1065 aa		11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	PCDHGA5	Q9Y5G8	931 aa		11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	ACTL7A	Q9Y615	435 aa		11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	PI4KA	P42356	2102 aa		11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	CACNA1E	Q15878	2313 aa		11.18	□□□□□ -0.62
NAPA-222	ENST00000602174	TARSL2	A2RTX5	802 aa	Known RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	TBC1D3B	A6NDS4	549 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	NDC80	O14777	642 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	GIPC1	O14908	333 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	MUSK	O15146	869 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	ZBTB24	O43167	697 aa	Predicted RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	SMAD6	O43541	496 aa	Known RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	ZNF821	O75541	412 aa	Predicted RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	GSR	P00390	522 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	MT-CO1	P00395	513 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	ZSCAN5DP	P0CG00	497 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	ETS1	P14921	441 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	NFKB1	P19838	968 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	PSMB4	P28070	264 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	KIR2DL1	P43626	348 aa	Predicted RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	CSNK1D	P48730	415 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	NUMB	P49757	651 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	DRG2	P55039	364 aa	Known RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	RHOA	P61586	193 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	SHC2	P98077	582 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	PARP6	Q2NL67	630 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	LEKR1	Q6ZMV7	388 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	PRUNE1	Q86TP1	453 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	SFTPA1	Q8IWL2	248 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	PGBD5	Q8N414	524 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	ATP11C	Q8NB49	1132 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	TSEN2	Q8NCE0	465 aa	Known RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	KCNV2	Q8TDN2	545 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	USP33	Q8TEY7	942 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	FRS2	Q8WU20	508 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	TADA1	Q96BN2	335 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	IMP4	Q96G21	291 aa	Known RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	AGAP3	Q96P47	875 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	NUDCD1	Q96RS6	583 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	SLC25A51	Q9H1U9	297 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	NT5M	Q9NPB1	228 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	EIF2B3	Q9NR50	452 aa	Known RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	VPS45	Q9NRW7	570 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	EBF1	Q9UH73	591 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	ASIC3	Q9UHC3	531 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	RSPH14	Q9UHP6	348 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	DMGDH	Q9UI17	866 aa	Known RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	HCN2	Q9UL51	889 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	FCF1	Q9Y324	198 aa	Known RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	UTP11	Q9Y3A2	253 aa	Known RBP	11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	CKAP5	Q14008	2032 aa		11.17	□□□□□ -0.62
NAPA-222	ENST00000602174	PKD1L2	Q7Z442	2459 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	DSP	P15924	2871 aa	Known RBP	11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	PLXND1	Q9Y4D7	1925 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174		K7EQS6	105 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174		K7ERQ8	282 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	DNALI1	O14645	258 aa	Predicted RBP	11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	NEBL	O76041	1014 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	SEC31A	O94979	1220 aa	Known RBP	11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	METTL18	O95568	372 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	APBB3	O95704	486 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	IGSF6	O95976	241 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	TPSB2	P20231	275 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	BCKDHB	P21953	392 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	CES1	P23141	567 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	NNMT	P40261	264 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	MAPK8	P45983	427 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	RGR	P47804	291 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	ST8SIA6	P61647	398 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	AP1S1	P61966	158 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	MRPS25	P82663	173 aa	Known RBP	11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	GPS1	Q13098	491 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	ZNF234	Q14588	700 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	KCNJ11	Q14654	390 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	TRIP13	Q15645	432 aa	Predicted RBP	11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	TPSAB1	Q15661	275 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	DLG2	Q15700	870 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	FBXO43	Q4G163	708 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	EGFLAM	Q63HQ2	1017 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	PID1	Q7Z2X4	250 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	OR2AP1	Q8NGE2	309 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	ARRDC2	Q8TBH0	407 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	CYB5D2	Q8WUJ1	264 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	SORCS1	Q8WY21	1168 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	LRRC45	Q96CN5	670 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	SNF8	Q96H20	258 aa		11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	RPL10L	Q96L21	214 aa	Known RBP	11.16	□□□□□ -0.62
NAPA-222	ENST00000602174	GDAP1L1	Q96MZ0	367 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms