RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 GOLGA4Q13439 2230 aaKnown RBP8.9□□□□□ -0.98
SSBP4-208ENST00000600628 TBC1D3DA0A087WVF3 549 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TBC1D3IA0A087WXS9 549 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TBC1D3EA0A087X179 549 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TBC1D3KA0A087X1G2 549 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 A0A1B0GVT2 93 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 A0A1W2PQU0 124 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TBC1D3FA6NER0 549 aaPredicted RBP8.89□□□□□ -0.99
SSBP4-208ENST00000600628 FAM47DPA6NHR8 397 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 SOWAHDA6NJG2 315 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TBC1D3LB9A6J9 549 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 GIPC1O14908 333 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TSPAN6O43657 245 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 MFSD11O43934 449 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 PCDHGA12O60330 932 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 IGSF6O95976 241 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 UGT2B4P06133 528 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TBC1D3HP0C7X1 549 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 KCNA4P22459 653 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 SERPINB6P35237 376 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 GARSP41250 739 aaKnown RBP8.89□□□□□ -0.99
SSBP4-208ENST00000600628 RXRGP48443 463 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 NOVA1P51513 510 aaKnown RBP8.89□□□□□ -0.99
SSBP4-208ENST00000600628 HNRNPDQ14103 355 aaKnown RBP8.89□□□□□ -0.99
SSBP4-208ENST00000600628 MESDQ14696 234 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 HLA-BQ31612 363 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TMEM52BQ4KMG9 183 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 SETMARQ53H47 684 aaPredicted RBP8.89□□□□□ -0.99
SSBP4-208ENST00000600628 RALGPS1Q5JS13 557 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TBC1D3GQ6DHY5 549 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TBC1D3CQ6IPX1 549 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 KIAA1161Q6NSJ0 714 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 C11orf63Q6NUN7 778 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 IL27RAQ6UWB1 636 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 GDPD4Q6W3E5 623 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 GLRX5Q86SX6 157 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 SRLQ86TD4 932 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 SPATS2Q86XZ4 545 aaKnown RBP8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TBC1D3Q8IZP1 549 aaPredicted RBP8.89□□□□□ -0.99
SSBP4-208ENST00000600628 LRRC57Q8N9N7 239 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 OR6K2Q8NGY2 324 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 SNX19Q92543 992 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 CENPTQ96BT3 561 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 HDAC11Q96DB2 347 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 BMFQ96LC9 184 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 SLC6A18Q96N87 628 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 ANP32EQ9BTT0 268 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 LACRTQ9GZZ8 138 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 SUV39H2Q9H5I1 410 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 ZDHHC6Q9H6R6 413 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 IL21RQ9HBE5 538 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 DTLQ9NZJ0 730 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 AMACRQ9UHK6 382 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 GGT7Q9UJ14 662 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 TFR2Q9UP52 801 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 FNDC3AQ9Y2H6 1198 aaKnown RBP8.89□□□□□ -0.99
SSBP4-208ENST00000600628 HS3ST3A1Q9Y663 406 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 ALG6Q9Y672 507 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 KNTC1P50748 2209 aa8.89□□□□□ -0.99
SSBP4-208ENST00000600628 KMT2BQ9UMN6 2715 aaPredicted RBP8.89□□□□□ -0.99
SSBP4-208ENST00000600628 PTPRBP23467 1997 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 CFAP69A5D8W1 941 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 PRAMEF26H0Y7S4 382 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 TLR4O00206 839 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 KRIT1O00522 736 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 DAPK3O43293 454 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 PSTPIP1O43586 416 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 BNIP3LO60238 219 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 FZD6O60353 706 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 DFNA5O60443 496 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 PALMO75781 387 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 GM2AP17900 193 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 COMTP21964 271 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 CCNCP24863 283 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 CYLC1P35663 651 aaPredicted RBP8.88□□□□□ -0.99
SSBP4-208ENST00000600628 HSPA9P38646 679 aaKnown RBP8.88□□□□□ -0.99
SSBP4-208ENST00000600628 MMP12P39900 470 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 CDKN2BP42772 138 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 NXPH1P58417 271 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 RHOAP61586 193 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 AP1S1P61966 158 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 RPS21P63220 83 aaKnown RBP8.88□□□□□ -0.99
SSBP4-208ENST00000600628 GBE1Q04446 702 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 RAD51Q06609 339 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 LBRQ14739 615 aaKnown RBP8.88□□□□□ -0.99
SSBP4-208ENST00000600628 TEAD4Q15561 434 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 UGP2Q16851 508 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 SEL1L3Q68CR1 1132 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 BRAT1Q6PJG6 821 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 LAYNQ6UX15 382 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 PRPF39Q86UA1 669 aaKnown RBP8.88□□□□□ -0.99
SSBP4-208ENST00000600628 CAMK1DQ8IU85 385 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 MAP7D3Q8IWC1 876 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 KATNAL2Q8IYT4 538 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 DENND6BQ8NEG7 585 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 DEFB124Q8NES8 71 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 TPCN2Q8NHX9 752 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 FAM174AQ8TBP5 190 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 TADA1Q96BN2 335 aa8.88□□□□□ -0.99
SSBP4-208ENST00000600628 FEM1CQ96JP0 617 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms