RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 APOC4-APOC2K7ER74 178 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 MUSKO15146 869 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 ATP8B1O43520 1251 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 GJB3O75712 270 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 SEMA4FO95754 770 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 PEX11BO96011 259 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 APOC2P02655 101 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 XPAP23025 273 aaPredicted RBP20.35■□□□□ 0.85
IRF3-221ENST00000598808 ACSL1P33121 698 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 OTUD4Q01804 1114 aaKnown RBP20.35■□□□□ 0.85
IRF3-221ENST00000598808 PLK5Q496M5 336 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 FBXO38Q6PIJ6 1188 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 GDPD4Q6W3E5 623 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 SGK2Q9HBY8 427 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 WSB2Q9NYS7 404 aaPredicted RBP20.35■□□□□ 0.85
IRF3-221ENST00000598808 GMEB2Q9UKD1 530 aa20.35■□□□□ 0.85
IRF3-221ENST00000598808 RNF103O00237 685 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 JCHAINP01591 159 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 LMNAP02545 664 aaKnown RBP20.34■□□□□ 0.85
IRF3-221ENST00000598808 SERPINA4P29622 427 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 DRD3P35462 400 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 CCDC15Q0P6D6 951 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 HNRNPDQ14103 355 aaKnown RBP20.34■□□□□ 0.85
IRF3-221ENST00000598808 FBXL19Q6PCT2 694 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 ASCL5Q7RTU5 278 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 ADAT2Q7Z6V5 191 aaKnown RBP20.34■□□□□ 0.85
IRF3-221ENST00000598808 ACTL9Q8TC94 416 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 PDCD6IPQ8WUM4 868 aaKnown RBP20.34■□□□□ 0.85
IRF3-221ENST00000598808 LRIG1Q96JA1 1093 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 BRD8Q9H0E9 1235 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 DUSP15Q9H1R2 295 aaPredicted RBP20.34■□□□□ 0.85
IRF3-221ENST00000598808 SEMA4AQ9H3S1 761 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 ATP13A3Q9H7F0 1226 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 NCDNQ9UBB6 729 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 FZD4Q9ULV1 537 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 EFR3BQ9Y2G0 817 aa20.34■□□□□ 0.85
IRF3-221ENST00000598808 WDR87Q6ZQQ6 2873 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 LRRC72A6NJI9 287 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 CEP104O60308 925 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 FSBPO95073 299 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 ITGB7P26010 798 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 MAPK8P45983 427 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 NEK3P51956 506 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 EIF3EP60228 445 aaKnown RBP20.33■□□□□ 0.85
IRF3-221ENST00000598808 AP1S1P61966 158 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 BCL2L1Q07817 233 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 GRM3Q14832 879 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 ZNF805Q5CZA5 627 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 LRRC73Q5JTD7 316 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 FAM182AQ5T1J6 154 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 PMS2CLQ68D20 193 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 ERN2Q76MJ5 926 aaKnown RBP20.33■□□□□ 0.85
IRF3-221ENST00000598808 PARS2Q7L3T8 475 aaKnown RBP20.33■□□□□ 0.85
IRF3-221ENST00000598808 PGBD5Q8N414 524 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 MAML1Q92585 1016 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 HSPA12BQ96MM6 686 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 MGME1Q9BQP7 344 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 POLR1EQ9GZS1 481 aaKnown RBP20.33■□□□□ 0.85
IRF3-221ENST00000598808 PLXND1Q9Y4D7 1925 aa20.33■□□□□ 0.85
IRF3-221ENST00000598808 THADAQ6YHU6 1953 aa20.33■□□□□ 0.84
IRF3-221ENST00000598808 CFAP54Q96N23 3096 aa20.33■□□□□ 0.84
IRF3-221ENST00000598808 TBC1D3DA0A087WVF3 549 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 TBC1D3IA0A087WXS9 549 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 TBC1D3EA0A087X179 549 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 TBC1D3KA0A087X1G2 549 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 TBC1D3FA6NER0 549 aaPredicted RBP20.32■□□□□ 0.84
IRF3-221ENST00000598808 TBC1D3LB9A6J9 549 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 NEMP1O14524 444 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 IGLV3-19P01714 112 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 HLA-DQB2P05538 268 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 TBC1D3HP0C7X1 549 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 ADPRHP54922 357 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 CREB5Q02930 508 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 ZBTB17Q13105 803 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 NOMO1Q15155 1222 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 MAP9Q49MG5 647 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 LYSMD4Q5XG99 296 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 TBC1D3GQ6DHY5 549 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 LAIR1Q6GTX8 287 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 TBC1D3CQ6IPX1 549 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 CYP2U1Q7Z449 544 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 CAMK1DQ8IU85 385 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 CDKL3Q8IVW4 592 aaPredicted RBP20.32■□□□□ 0.84
IRF3-221ENST00000598808 RGL4Q8IZJ4 473 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 TBC1D3Q8IZP1 549 aaPredicted RBP20.32■□□□□ 0.84
IRF3-221ENST00000598808 AGAP3Q96P47 875 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 QKIQ96PU8 341 aaKnown RBP eCLIP20.32■□□□□ 0.84
IRF3-221ENST00000598808 SEMA3CQ99985 751 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 FERMT1Q9BQL6 677 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 C6orf106Q9H6K1 298 aaPredicted RBP20.32■□□□□ 0.84
IRF3-221ENST00000598808 ARFGAP3Q9NP61 516 aa20.32■□□□□ 0.84
IRF3-221ENST00000598808 ATXN2Q99700 1313 aaKnown RBP20.32■□□□□ 0.84
IRF3-221ENST00000598808 SPAG17Q6Q759 2223 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 C16orf96A6NNT2 1141 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 GFRA3O60609 400 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 PTGER3P43115 390 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 DSC2Q02487 901 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 NSUN2Q08J23 767 aaKnown RBP eCLIP20.31■□□□□ 0.84
IRF3-221ENST00000598808 PRKD1Q15139 912 aaPredicted RBP20.31■□□□□ 0.84
IRF3-221ENST00000598808 SLC45A4Q5BKX6 768 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms