RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 TUBGCP5Q96RT8 1024 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 KLF6Q99612 283 aaPredicted RBP13.21□□□□□ -0.29
USE1-207ENST00000596136 CDC6Q99741 560 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 DEF6Q9H4E7 631 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 SUV39H2Q9H5I1 410 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 CTTNBP2NLQ9P2B4 639 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 CA5BQ9Y2D0 317 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 PCDHB9Q9Y5E1 797 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 COL5A1P20908 1838 aaPredicted RBP13.2□□□□□ -0.3
USE1-207ENST00000596136 AKR1B15C9JRZ8 316 aaPredicted RBP13.2□□□□□ -0.3
USE1-207ENST00000596136 DFFAO00273 331 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 BUB1BO60566 1050 aaPredicted RBP13.2□□□□□ -0.3
USE1-207ENST00000596136 MAFKO60675 156 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 PALMO75781 387 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 PAK4O96013 591 aaPredicted RBP13.2□□□□□ -0.3
USE1-207ENST00000596136 RGRP47804 291 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 ARRB1P49407 418 aaPredicted RBP13.2□□□□□ -0.3
USE1-207ENST00000596136 CDH6P55285 790 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 ATP13A4Q4VNC1 1196 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 PRAMEF14Q5SWL7 426 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 GCNT7Q6ZNI0 430 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 RAB44Q7Z6P3 723 aaPredicted RBP13.2□□□□□ -0.3
USE1-207ENST00000596136 SRLQ86TD4 932 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 TTC7BQ86TV6 843 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 CPNE8Q86YQ8 564 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 DCP2Q8IU60 420 aaKnown RBP13.2□□□□□ -0.3
USE1-207ENST00000596136 LRRC49Q8IUZ0 686 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 TC2NQ8N9U0 490 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 SLC35G2Q8TBE7 412 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 IFT43Q96FT9 208 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 EXOC2Q96KP1 924 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 BMFQ96LC9 184 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 TRIM5Q9C035 493 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 SP110Q9HB58 689 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 TOR4AQ9NXH8 423 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 GGT7Q9UJ14 662 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 INTUQ9ULD6 942 aa13.2□□□□□ -0.3
USE1-207ENST00000596136 MAP1BP46821 2468 aaKnown RBP13.19□□□□□ -0.3
USE1-207ENST00000596136 FRYQ5TBA9 3013 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 KNTC1P50748 2209 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 IGLON5A6NGN9 336 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 MUSKO15146 869 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 RAD51BO15315 384 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 CD48P09326 243 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 FTH1P19P0C7X4 201 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 THEGLP0DJG4 465 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 EPHA8P29322 1005 aaPredicted RBP13.19□□□□□ -0.3
USE1-207ENST00000596136 SERPINB6P35237 376 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 ARHGAP25P42331 645 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 RENBPP51606 427 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 TAS2R40P59535 323 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 SLC10A7Q0GE19 358 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 FOXC1Q12948 553 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 DPYSL3Q14195 570 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 PDK2Q15119 407 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 UGP2Q16851 508 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 TMEM52BQ4KMG9 183 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 BRAT1Q6PJG6 821 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 KYAT3Q6YP21 454 aaKnown RBP13.19□□□□□ -0.3
USE1-207ENST00000596136 SLCO6A1Q86UG4 719 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 RHOT2Q8IXI1 618 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 DENND6BQ8NEG7 585 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 OR13H1Q8NG92 308 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 ADAMTS14Q8WXS8 1223 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 CENPTQ96BT3 561 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 FAF2Q96CS3 445 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 ECHDC3Q96DC8 303 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 NSMCE3Q96MG7 304 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 CNTNAP3BQ96NU0 1288 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 ZNF670Q9BS34 389 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 CINPQ9BW66 212 aaPredicted RBP13.19□□□□□ -0.3
USE1-207ENST00000596136 CNTNAP3Q9BZ76 1288 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 FZD3Q9NPG1 666 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 SPTLC3Q9NUV7 552 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 KLHL11Q9NVR0 708 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 SEPT3Q9UH03 358 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 ITM2BQ9Y287 266 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 ANKRD36A6QL64 1941 aa13.19□□□□□ -0.3
USE1-207ENST00000596136 AKAP13Q12802 2813 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 POM121BA6NF01 834 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 TRAFD1O14545 582 aaPredicted RBP13.18□□□□□ -0.3
USE1-207ENST00000596136 TNFSF14O43557 240 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 PIGNO95427 931 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 LCA5LO95447 670 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 TOP3BO95985 862 aaKnown RBP13.18□□□□□ -0.3
USE1-207ENST00000596136 KRT7P08729 469 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 ITIH2P19823 946 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 CR2P20023 1033 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 HSPA9P38646 679 aaKnown RBP13.18□□□□□ -0.3
USE1-207ENST00000596136 CLDN2P57739 230 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 IL9RQ01113 521 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 ELP6Q0PNE2 266 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 BNIP3Q12983 259 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 MMRN1Q13201 1228 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 SGCGQ13326 291 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 KRT81Q14533 505 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 LBRQ14739 615 aaKnown RBP13.18□□□□□ -0.3
USE1-207ENST00000596136 PAFAH1B3Q15102 231 aaKnown RBP13.18□□□□□ -0.3
USE1-207ENST00000596136 AGERQ15109 404 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms