RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 C9orf43Q8TAL5 461 aaPredicted RBP13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 GPT2Q8TD30 523 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 TBATAQ96M53 351 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 CMKLR1Q99788 373 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 SIK2Q9H0K1 926 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 FAM204AQ9H8W3 233 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 POPDC2Q9HBU9 364 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 DDIT4Q9NX09 232 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 TUBD1Q9UJT1 453 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 SNX10Q9Y5X0 201 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 ACTL7AQ9Y615 435 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 HS3ST4Q9Y661 456 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 LRRK1Q38SD2 2015 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 M0QYT0 321 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 NEMP1O14524 444 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 NKX2-8O15522 239 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 AP1G1O43747 822 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 CLDN11O75508 207 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 RHOCP08134 193 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 CCR1P32246 355 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 RECQLP46063 649 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 UQCRFS1P47985 274 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 RPL34P49207 117 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 GCNT1Q02742 428 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 EHBP1Q8NDI1 1231 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 SCG3Q8WXD2 468 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 ABHD17AQ96GS6 310 aa13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 C2orf49Q9BVC5 232 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 INTS2Q9H0H0 1204 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-208ENST00000595726 E5RJQ4 531 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 STMND1H3BQB6 276 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 SART1O43290 800 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 TSPAN6O43657 245 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 KRT7P08729 469 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 RNF224P0DH78 156 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 CTSEP14091 401 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 ITIH2P19823 946 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 HK3P52790 923 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 ELOCQ15369 112 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 ALG11Q2TAA5 492 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 SDK2Q58EX2 2172 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 LRRC73Q5JTD7 316 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 KCTD16Q68DU8 428 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 MACC1Q6ZN28 852 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 RRAGAQ7L523 313 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 SLITRK4Q8IW52 837 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 DEFB106AQ8N104 65 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 IL22RA1Q8N6P7 574 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 DENND6BQ8NEG7 585 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 OR7D4Q8NG98 312 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 OR6K2Q8NGY2 324 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 ASB12Q8WXK4 309 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 TMEM159Q96B96 161 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 KREMEN1Q96MU8 473 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 HEPHQ9BQS7 1158 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 SPON2Q9BUD6 331 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 EDEM3Q9BZQ6 932 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 RDH14Q9HBH5 336 aa13.94□□□□□ -0.18
SHKBP1-208ENST00000595726 POLQO75417 2590 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 OTOGQ6ZRI0 2925 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 A1L4Q6 167 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 C16orf96A6NNT2 1141 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 MMP20O60882 483 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 PAGE1O75459 146 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 AGFG2O95081 481 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 ADCY5O95622 1261 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 PRKAR1AP10644 381 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 SLC2A3P11169 496 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 NR1D1P20393 614 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 COL8A1P27658 744 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 CD82P27701 267 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 ERCC5P28715 1186 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 CD97P48960 835 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 CLCN6P51797 869 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 CCNHP51946 323 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 CDH4P55283 916 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 YPEL5P62699 121 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 CDK17Q00537 523 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 NME3Q13232 169 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 TPD52L1Q16890 204 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 CARD16Q5EG05 197 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 TMEM164Q5U3C3 297 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 ZNF787Q6DD87 383 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 LVRNQ6Q4G3 990 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 RBM43Q6ZSC3 357 aaKnown RBP13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 SPRED1Q7Z699 444 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 TFAP2DQ7Z6R9 452 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 ATCAYQ86WG3 371 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 CREBRFQ8IUR6 639 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 FSTL5Q8N475 847 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 RCBTB1Q8NDN9 531 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 GPR156Q8NFN8 814 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 SLC4A5Q9BY07 1137 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 THAP9Q9H5L6 903 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 ZDHHC6Q9H6R6 413 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 ANLNQ9NQW6 1124 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 TMPRSS4Q9NRS4 437 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 APPL1Q9UKG1 709 aa13.93□□□□□ -0.18
SHKBP1-208ENST00000595726 FCF1Q9Y324 198 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms